RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 KHDC1Q4VXA5 237 aaKnown RBP4.85□□□□□ -1.63
SPG11-218ENST00000559754 CCDC181Q5TID7 509 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 MICALCLQ6ZW33 695 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 SLC17A8Q8NDX2 589 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 NTN5Q8WTR8 489 aaPredicted RBP4.85□□□□□ -1.63
SPG11-218ENST00000559754 DMRTA2Q96SC8 542 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 LRFN3Q9BTN0 628 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 CFAP97Q9P2B7 532 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 WASHC2CQ9Y4E1 1318 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 PCSK5Q92824 1860 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 TNKSO95271 1327 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 PROP1O75360 226 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 SUN1O94901 812 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 CHEK2O96017 543 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 RECQLP46063 649 aaPredicted RBP4.84□□□□□ -1.63
SPG11-218ENST00000559754 PTH2RP49190 550 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 PTPRRQ15256 657 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 CD300EQ496F6 205 aaPredicted RBP4.84□□□□□ -1.63
SPG11-218ENST00000559754 FLYWCH1Q4VC44 716 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 CCDC93Q567U6 631 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 ZNF362Q5T0B9 420 aaPredicted RBP4.84□□□□□ -1.63
SPG11-218ENST00000559754 KAZNQ674X7 775 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 TAPT1Q6NXT6 567 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 SLC4A10Q6U841 1118 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 ADGRG5Q8IZF4 528 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 PDPRQ8NCN5 879 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 C3orf20Q8ND61 904 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 TMIEQ8NEW7 156 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 SCAMP4Q969E2 229 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 FBXL20Q96IG2 436 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 VRK1Q99986 396 aaPredicted RBP4.84□□□□□ -1.63
SPG11-218ENST00000559754 BRD9Q9H8M2 597 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 SERPINB13Q9UIV8 391 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.84□□□□□ -1.63
SPG11-218ENST00000559754 COL4A3BPQ9Y5P4 624 aa4.84□□□□□ -1.63
SPG11-218ENST00000559754 F2RL2O00254 374 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 MGST3O14880 152 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SLC16A6O15403 523 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SOAT2O75908 522 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
SPG11-218ENST00000559754 GATA3P23771 443 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 GRIA3P42263 894 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 FXR1P51114 621 aaKnown RBP eCLIP4.83□□□□□ -1.64
SPG11-218ENST00000559754 NXPH1P58417 271 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 NHLH1Q02575 133 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 ITIH3Q06033 890 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SNAPC2Q13487 334 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 ARHGEF25Q86VW2 580 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 CERS3Q8IU89 383 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 B3GALNT2Q8NCR0 500 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 TOR1AIP2Q8NFQ8 470 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SLC30A5Q8TAD4 765 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 UROC1Q96N76 676 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 TRIB1Q96RU8 372 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SLC45A2Q9UMX9 530 aa4.83□□□□□ -1.64
SPG11-218ENST00000559754 SPATA31A3Q5VYP0 1347 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 NPTX2P47972 431 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 SOX10P56693 466 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 EVA1CP58658 441 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 DSC2Q02487 901 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 ODF1Q14990 250 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 NSUN7Q8NE18 718 aaKnown RBP4.82□□□□□ -1.64
SPG11-218ENST00000559754 SMAD5Q99717 465 aaKnown RBP4.82□□□□□ -1.64
SPG11-218ENST00000559754 TIMP4Q99727 224 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 CNPPD1Q9BV87 410 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 ASPSCR1Q9BZE9 553 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 KLK15Q9H2R5 256 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 WDCPQ9H6R7 721 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 PCDH12Q9NPG4 1184 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
SPG11-218ENST00000559754 ENTPD2Q9Y5L3 495 aa4.82□□□□□ -1.64
SPG11-218ENST00000559754 COL11A2P13942 1736 aaPredicted RBP4.82□□□□□ -1.64
SPG11-218ENST00000559754 NT5C1B-RDH14C9J2C7 533 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 POLRMTO00411 1230 aaKnown RBP4.81□□□□□ -1.64
SPG11-218ENST00000559754 TRIAP1O43715 76 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 GJB1P08034 283 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 ZNF37AP17032 561 aaPredicted RBP4.81□□□□□ -1.64
SPG11-218ENST00000559754 WT1P19544 449 aaPredicted RBP4.81□□□□□ -1.64
SPG11-218ENST00000559754 PIK3CGP48736 1102 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 MAPK10P53779 464 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 COLEC12Q5KU26 742 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 TMEM240Q5SV17 173 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 TMPRSS9Q7Z410 1059 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 PEG10Q86TG7 708 aaKnown RBP4.81□□□□□ -1.64
SPG11-218ENST00000559754 POC1BQ8TC44 478 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 ZNF384Q8TF68 577 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 TFAP2BQ92481 460 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 LPIN2Q92539 896 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 DDX17Q92841 729 aaKnown RBP4.81□□□□□ -1.64
SPG11-218ENST00000559754 FAM167AQ96KS9 214 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 HOMER2Q9NSB8 354 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 FEZ2Q9UHY8 353 aaPredicted RBP4.81□□□□□ -1.64
SPG11-218ENST00000559754 ZDHHC8Q9ULC8 765 aa4.81□□□□□ -1.64
SPG11-218ENST00000559754 A0A0B4J269 797 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 ZNF785A8K8V0 405 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 E9PLN8 166 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 F5H697 171 aa4.8□□□□□ -1.64
SPG11-218ENST00000559754 GCOM1H8Y6P7 765 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms