RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 FMO5P49326 533 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 TAF6P49848 677 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 MXI1P50539 228 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 KRT17Q04695 432 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 KCNH2Q12809 1159 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 NCOA4Q13772 614 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 KCNC3Q14003 757 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 SOWAHAQ2M3V2 549 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 TCP11X2Q5H9J9 407 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 DCAF17Q5H9S7 520 aaPredicted RBP9.73□□□□□ -0.85
HMG20A-209ENST00000559728 FAM171A1Q5VUB5 890 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 KRT39Q6A163 491 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 SPOPLQ6IQ16 392 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 PRSS55Q6UWB4 352 aaPredicted RBP9.73□□□□□ -0.85
HMG20A-209ENST00000559728 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.73□□□□□ -0.85
HMG20A-209ENST00000559728 LUZP1Q86V48 1076 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 OSTM1Q86WC4 334 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 GAS2L3Q86XJ1 694 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 PIK3R5Q8WYR1 880 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 ZDHHC16Q969W1 377 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 MRPL38Q96DV4 380 aaKnown RBP9.73□□□□□ -0.85
HMG20A-209ENST00000559728 HPDLQ96IR7 371 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 TCF25Q9BQ70 676 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 PI4K2AQ9BTU6 479 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 LMAN2LQ9H0V9 348 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 SDCBP2Q9H190 292 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 RXFP1Q9HBX9 757 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 TLR9Q9NR96 1032 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 LMCD1Q9NZU5 365 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 L1RE1Q9UN81 338 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 NUB1Q9Y5A7 615 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 TIMM13Q9Y5L4 95 aaPredicted RBP9.73□□□□□ -0.85
HMG20A-209ENST00000559728 REV3LO60673 3130 aa9.73□□□□□ -0.85
HMG20A-209ENST00000559728 KCNJ18B7U540 433 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 TULP1O00294 542 aaPredicted RBP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 GABRDO14764 452 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 SYN3O14994 580 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 HCRTO43612 131 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 OAZ2O95190 189 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 CSPG5O95196 566 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 FGFR1OPO95684 399 aaKnown RBP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 KRT19P08727 400 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 CNPP09543 421 aaKnown RBP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 TYMPP19971 482 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 EEF1GP26641 437 aaKnown RBP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 GTF2F1P35269 517 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 PNPLA4P41247 253 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 ASPAP45381 313 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 GLUD2P49448 558 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 KCNJ12Q14500 433 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 COL19A1Q14993 1142 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 KRT31Q15323 416 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 USP41Q3LFD5 358 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 TCERG1LQ5VWI1 586 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 WSCD1Q658N2 575 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 GPR65Q8IYL9 337 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 VN1R2Q8NFZ6 395 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 CLSTN3Q9BQT9 956 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 TUBGCP2Q9BSJ2 902 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 TTPALQ9BTX7 342 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 MMRN2Q9H8L6 949 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 RAB20Q9NX57 234 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 LIMA1Q9UHB6 759 aaKnown RBP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 PUF60Q9UHX1 559 aaKnown RBP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
HMG20A-209ENST00000559728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMG20A-209ENST00000559728 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.85
HMG20A-209ENST00000559728 PDCD11Q14690 1871 aaKnown RBP9.71□□□□□ -0.85
HMG20A-209ENST00000559728 CYB561D2O14569 222 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 TEX28O15482 410 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 MAP3K7O43318 606 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 VNN2O95498 520 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 CXCL14O95715 111 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 AFPP02771 609 aaKnown RBP9.71□□□□□ -0.86
HMG20A-209ENST00000559728 RPL17P18621 184 aaKnown RBP9.71□□□□□ -0.86
HMG20A-209ENST00000559728 PAX3P23760 479 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 ATICP31939 592 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.86
HMG20A-209ENST00000559728 APBA1Q02410 837 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 KCNMA1Q12791 1236 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 HYAL1Q12794 435 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 ELAVL2Q12926 359 aaKnown RBP9.71□□□□□ -0.86
HMG20A-209ENST00000559728 BIRC3Q13489 604 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 MAN2A1Q16706 1144 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 CCDC142Q17RM4 750 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 SV2CQ496J9 727 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 VWA3BQ502W6 1294 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 TCEAL5Q5H9L2 206 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 DSTYKQ6XUX3 929 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 TMC7Q7Z402 723 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 PDCL2Q8N4E4 241 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 TOP6BLQ8N6T0 577 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 FBXL13Q8NEE6 735 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 OR10T2Q8NGX3 314 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 FEZF2Q8TBJ5 459 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 FAM200AQ8TCP9 573 aa9.71□□□□□ -0.86
HMG20A-209ENST00000559728 SLC22A17Q8WUG5 538 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms