RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF536O15090 1300 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 STK25O00506 426 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 EIF3HO15372 352 aaKnown RBP eCLIP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 KIF1CO43896 1103 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 SMIM24O75264 130 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 KRT3P12035 628 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 HNRNPH1P31943 449 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 SLC20A2Q08357 652 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 CAPSQ13938 189 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 GRK7Q8WTQ7 553 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 DHX38Q92620 1227 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 HPCAL4Q9UM19 191 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 FOXN3O00409 490 aaPredicted RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 MCF2LO15068 1137 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 GRAP2O75791 330 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 SUN1O94901 812 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 LUC7L3O95232 432 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 DNAJB2P25686 324 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CLK2P49760 499 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 STILQ15468 1287 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 NPY5RQ15761 445 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 SPOPLQ6IQ16 392 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 GPAT2Q6NUI2 795 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 ACOT1Q86TX2 421 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 NLRP14Q86W24 1093 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 DNAJC19Q96DA6 116 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 ERGIC2Q96RQ1 377 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CGRRF1Q99675 332 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 TARSL2A2RTX5 802 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 PGRMC1O00264 195 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 IGF2BP3O00425 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CREB3O43889 395 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CAPN15O75808 1086 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CUL2Q13617 745 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 IKBKEQ14164 716 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CAPN12Q6ZSI9 719 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 CTAGE3PQ8IX95 158 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 ELMO3Q96BJ8 720 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 RSAD1Q9HA92 442 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 GEMIN8Q9NWZ8 242 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 TRAF3IP3Q9Y228 551 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF185O15231 689 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 SART1O43290 800 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 RECQL4O94761 1208 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 XPAP23025 273 aaPredicted RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 BRD2P25440 801 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 FYB2Q5VWT5 728 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 SLC45A1Q9Y2W3 748 aa11.25□□□□□ -0.61
CARMIL3-202ENST00000559694 TREHO43280 583 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ODC1P11926 461 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 PON1P27169 355 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 CD52P31358 61 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ICAM3P32942 547 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 RAB27AP51159 221 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 SESN3P58005 492 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 MYBPC2Q14324 1141 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 CCNI2Q6ZMN8 369 aaPredicted RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 CEP128Q6ZU80 1094 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 NECAB2Q7Z6G3 386 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 TMEM161BQ8NDZ6 487 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 GABPB2Q8TAK5 448 aaPredicted RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ZBTB10Q96DT7 871 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 RAB3IPQ96QF0 476 aaPredicted RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 VPS37BQ9H9H4 285 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 TRPC7Q9HCX4 862 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 WDR70Q9NW82 654 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 TRIM10Q9UDY6 481 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 TLL2Q9Y6L7 1015 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 RALAP11233 206 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 PDGFRAP16234 1089 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 AXLP30530 894 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 RASSF2P50749 326 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 PRMT2P55345 433 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 CDK17Q00537 523 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ZKSCAN8Q15776 578 aaPredicted RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 FBXO47Q5MNV8 452 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 SPATA4Q8NEY3 305 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 DDX20Q9UHI6 824 aaKnown RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 HEY1Q9Y5J3 304 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 LACTBL1A8MY62 500 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF862O60290 1169 aa11.24□□□□□ -0.61
CARMIL3-202ENST00000559694 KRT15P19012 456 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms