RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 RBP5P82980 135 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 YWHAHQ04917 246 aaPredicted RBP20.15■□□□□ 0.82
CASC4-209ENST00000559222 ADAM9Q13443 819 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 SMAD2Q15796 467 aaKnown RBP20.15■□□□□ 0.82
CASC4-209ENST00000559222 SV2CQ496J9 727 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 SLC8B1Q6J4K2 584 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 ZNF280DQ6N043 979 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 PDXDC1Q6P996 788 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 OSTM1Q86WC4 334 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 FAM186BQ8IYM0 893 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 LRRC52Q8N7C0 313 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 APPL2Q8NEU8 664 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 DUSP9Q99956 384 aaKnown RBP20.15■□□□□ 0.82
CASC4-209ENST00000559222 CD320Q9NPF0 282 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 L1RE1Q9UN81 338 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 FRMD4BQ9Y2L6 1034 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 H7C4K7 107 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 OAZ2O95190 189 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 SEC24AO95486 1093 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 C4BPAP04003 597 aaKnown RBP20.14■□□□□ 0.81
CASC4-209ENST00000559222 CYP11A1P05108 521 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 HOXB8P17481 243 aaPredicted RBP20.14■□□□□ 0.81
CASC4-209ENST00000559222 CCNE1P24864 410 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 STX17P56962 302 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 CLDN10P78369 228 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 CCDC142Q17RM4 750 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 OVOS1Q6IE37 1185 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 TTI2Q6NXR4 508 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 NELFBQ8WX92 580 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 ZNF707Q96C28 371 aaPredicted RBP20.14■□□□□ 0.81
CASC4-209ENST00000559222 NUP62CLQ9H1M0 184 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 ADAM7Q9H2U9 754 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 POMKQ9H5K3 350 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 SFXN1Q9H9B4 322 aa20.14■□□□□ 0.81
CASC4-209ENST00000559222 SPDYE4A6NLX3 237 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 SP100P23497 879 aaPredicted RBP20.13■□□□□ 0.81
CASC4-209ENST00000559222 VAMP7P51809 220 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 MYL6P60660 151 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 PPP3CAQ08209 521 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 RNF19BQ6ZMZ0 732 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 PDCL2Q8N4E4 241 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 SLC7A14Q8TBB6 771 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 TMC2Q8TDI7 906 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 HPDLQ96IR7 371 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 MED15Q96RN5 788 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 CRISPLD1Q9H336 500 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 SNX9Q9Y5X1 595 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 NOTCH4Q99466 2003 aa20.13■□□□□ 0.81
CASC4-209ENST00000559222 CCDC195A0A1B0GUA6 201 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 MAPK13O15264 365 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 LRRN2O75325 713 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 ZMYND10O75800 440 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 ABLIM3O94929 683 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 C8AP07357 584 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 PSMC2P35998 433 aaKnown RBP20.12■□□□□ 0.81
CASC4-209ENST00000559222 PNPLA4P41247 253 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 SOWAHAQ2M3V2 549 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 PUS10Q3MIT2 529 aaKnown RBP20.12■□□□□ 0.81
CASC4-209ENST00000559222 USP37Q86T82 979 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 TTC9BQ8N6N2 239 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 DHTKD1Q96HY7 919 aaPredicted RBP20.12■□□□□ 0.81
CASC4-209ENST00000559222 PGLYRP2Q96PD5 576 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 UHRF1Q96T88 793 aaPredicted RBP20.12■□□□□ 0.81
CASC4-209ENST00000559222 TSG101Q99816 390 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 XYLT2Q9H1B5 865 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 MMRN2Q9H8L6 949 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.12■□□□□ 0.813e-10■■■■■ 130.4
CASC4-209ENST00000559222 GDAP2Q9NXN4 497 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 POLIQ9UNA4 740 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 NME7Q9Y5B8 376 aa20.12■□□□□ 0.81
CASC4-209ENST00000559222 PSMA7O14818 248 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 CPB1P15086 417 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 RPL13P26373 211 aaKnown RBP20.11■□□□□ 0.81
CASC4-209ENST00000559222 GCLMP48507 274 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 ZP2Q05996 745 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 BIRC3Q13489 604 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 CBX2Q14781 532 aaPredicted RBP20.11■□□□□ 0.81
CASC4-209ENST00000559222 C15orf39Q6ZRI6 1047 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 GPR149Q86SP6 731 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 KBTBD7Q8WVZ9 684 aa20.11■□□□□ 0.81
CASC4-209ENST00000559222 CETN3O15182 167 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 CCL16O15467 120 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 ACAT1P24752 427 aaKnown RBP20.1■□□□□ 0.81
CASC4-209ENST00000559222 LRRC63Q05C16 580 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 ITIH3Q06033 890 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 STIM1Q13586 685 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 ZACNQ401N2 412 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 SV2AQ7L0J3 742 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 LIMS2Q7Z4I7 341 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 LRRTM3Q86VH5 581 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 TRIML1Q8N9V2 468 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 ZNF461Q8TAF7 563 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 HDAC7Q8WUI4 952 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 PLEKHA4Q9H4M7 779 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 TMLHEQ9NVH6 421 aa20.1■□□□□ 0.81
CASC4-209ENST00000559222 PHACTR2O75167 634 aa20.09■□□□□ 0.81
CASC4-209ENST00000559222 PAPLNO95428 1278 aa20.09■□□□□ 0.81
CASC4-209ENST00000559222 EPB41P11171 864 aaKnown RBP20.09■□□□□ 0.81
CASC4-209ENST00000559222 PAX3P23760 479 aa20.09■□□□□ 0.81
CASC4-209ENST00000559222 NTHL1P78549 312 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms