RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 DHX36Q9H2U1 1008 aaKnown RBP5.94□□□□□ -1.46
CASC4-207ENST00000559037 UCKL1Q9NWZ5 548 aa5.94□□□□□ -1.46
CASC4-207ENST00000559037 AATFQ9NY61 560 aaKnown RBP eCLIP5.94□□□□□ -1.46
CASC4-207ENST00000559037 PI4KBQ9UBF8 816 aa5.94□□□□□ -1.46
CASC4-207ENST00000559037 ZDHHC9Q9Y397 364 aa5.94□□□□□ -1.46
CASC4-207ENST00000559037 COL11A1P12107 1806 aaPredicted RBP5.94□□□□□ -1.46
CASC4-207ENST00000559037 MYO9BQ13459 2157 aa5.94□□□□□ -1.46
CASC4-207ENST00000559037 ZNF536O15090 1300 aa5.94□□□□□ -1.46
CASC4-207ENST00000559037 ADGRA2Q96PE1 1338 aa5.94□□□□□ -1.46
CASC4-207ENST00000559037 A0A0G2JNJ9 132 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 PDHXO00330 501 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 MAFGO15525 162 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 HMGCRP04035 888 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 ATP5JP18859 108 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 CTGFP29279 349 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 OCRLQ01968 901 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 ROM1Q03395 351 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 ARHGEF6Q15052 776 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 FASTKD5Q7L8L6 764 aaKnown RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 RTN4RL1Q86UN2 441 aaPredicted RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 CLASRPQ8N2M8 674 aaKnown RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 MAGEB6Q8N7X4 407 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 KIAA1958Q8N8K9 716 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 TGFBRAP1Q8WUH2 860 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 BORCS6Q96GS4 357 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 RIOK1Q9BRS2 568 aaKnown RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 DCTPP1Q9H773 170 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 UPF2Q9HAU5 1272 aaKnown RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.93□□□□□ -1.46
CASC4-207ENST00000559037 Q9UFV3 132 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 HERC5Q9UII4 1024 aaKnown RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 SLC45A1Q9Y2W3 748 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 SPO11Q9Y5K1 396 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 DDX60LQ5H9U9 1706 aaKnown RBP5.93□□□□□ -1.46
CASC4-207ENST00000559037 TRIOBPQ9H2D6 2365 aa5.93□□□□□ -1.46
CASC4-207ENST00000559037 PLXNA1Q9UIW2 1896 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 MKI67P46013 3256 aaKnown RBP5.92□□□□□ -1.46
CASC4-207ENST00000559037 ALPK3Q96L96 1907 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 TLDC2A0PJX2 215 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 IDH1O75874 414 aaKnown RBP5.92□□□□□ -1.46
CASC4-207ENST00000559037 KRT37O76014 449 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 F2P00734 622 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 NEK4P51957 841 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 SOX10P56693 466 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 SPP2Q13103 211 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 TTF1Q15361 905 aaPredicted RBP5.92□□□□□ -1.46
CASC4-207ENST00000559037 GRAMD4Q6IC98 578 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 TATDN1Q6P1N9 297 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 OTOP2Q7RTS6 562 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 PASD1Q8IV76 773 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 MAPKAPK5Q8IW41 473 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 EFHBQ8N7U6 833 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 FOXRED1Q96CU9 486 aaPredicted RBP5.92□□□□□ -1.46
CASC4-207ENST00000559037 NOL10Q9BSC4 688 aaKnown RBP5.92□□□□□ -1.46
CASC4-207ENST00000559037 ARHGAP39Q9C0H5 1083 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 TMX1Q9H3N1 280 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 DNAJC18Q9H819 358 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.92□□□□□ -1.46
CASC4-207ENST00000559037 CPA4Q9UI42 421 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 VWA7Q9Y334 891 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 MCM3APO60318 1980 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 FLT1P17948 1338 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 BRCA2P51587 3418 aa5.92□□□□□ -1.46
CASC4-207ENST00000559037 UBA6A0AVT1 1052 aaPredicted RBP5.91□□□□□ -1.46
CASC4-207ENST00000559037 NPEPPSL1A6NEC2 478 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 TRIM75PA6NK02 468 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 B4GALT4O60513 344 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 PRLP01236 227 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 ASNSP08243 561 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 IFIT2P09913 472 aaKnown RBP5.91□□□□□ -1.46
CASC4-207ENST00000559037 HSD3B2P26439 372 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 PSMC4P43686 418 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 PRMT2P55345 433 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 SESN2P58004 480 aaPredicted RBP5.91□□□□□ -1.46
CASC4-207ENST00000559037 NFYCQ13952 458 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 TTC38Q5R3I4 469 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 SLC9C2Q5TAH2 1124 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 CIR1Q86X95 450 aaPredicted RBP5.91□□□□□ -1.46
CASC4-207ENST00000559037 CERS3Q8IU89 383 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 MIGA1Q8NAN2 632 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 LPPQ93052 612 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 MAML3Q96JK9 1138 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 C16orf92Q96LL3 132 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 SLKQ9H2G2 1235 aaPredicted RBP5.91□□□□□ -1.46
CASC4-207ENST00000559037 JADE2Q9NQC1 790 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 SRRDQ9UH36 339 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 MYH6P13533 1939 aa5.91□□□□□ -1.46
CASC4-207ENST00000559037 GREB1LQ9C091 1923 aaPredicted RBP5.91□□□□□ -1.46
CASC4-207ENST00000559037 C19orf81C9J6K1 198 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 GOLIM4O00461 696 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 DVL2O14641 736 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 KPNA6O60684 536 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 CNOT4O95628 575 aaKnown RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 HOXD10P28358 340 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 HOXA7P31268 230 aaPredicted RBP5.9□□□□□ -1.46
CASC4-207ENST00000559037 MEOX1P50221 254 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 PLCD1P51178 756 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 BACE1P56817 501 aa5.9□□□□□ -1.46
CASC4-207ENST00000559037 DSG1Q02413 1049 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms