RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CCDC150Q8NCX0 1101 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
GABPB1-208ENST00000558970 HERC2P3Q9BVR0 1158 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 ZBP1Q9H171 429 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 XYLT2Q9H1B5 865 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 RAB20Q9NX57 234 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 LIMA1Q9UHB6 759 aaKnown RBP13.35□□□□□ -0.27
GABPB1-208ENST00000558970 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
GABPB1-208ENST00000558970 HCRTO43612 131 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 HUS1O60921 280 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 SLC9A1P19634 815 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 CDH8P55286 799 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 ARPP19P56211 112 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 CETN1Q12798 172 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 ELAVL2Q12926 359 aaKnown RBP13.34□□□□□ -0.27
GABPB1-208ENST00000558970 CAMK1Q14012 370 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 SGSM1Q2NKQ1 1148 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 WDR44Q5JSH3 913 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 WSCD1Q658N2 575 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-208ENST00000558970 MYLIPQ8WY64 445 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 TATDN2Q93075 761 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 SUSD3Q96L08 255 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 PCMTD1Q96MG8 357 aaPredicted RBP13.34□□□□□ -0.27
GABPB1-208ENST00000558970 TTPALQ9BTX7 342 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 INTS2Q9H0H0 1204 aaKnown RBP13.34□□□□□ -0.27
GABPB1-208ENST00000558970 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
GABPB1-208ENST00000558970 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
GABPB1-208ENST00000558970 MYH10P35580 1976 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 HIDE1A8MVS5 230 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 M0QZQ0 153 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 LPXNO60711 386 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 CXCL14O95715 111 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ASS1P00966 412 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 CD58P19256 250 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ATICP31939 592 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 KLK7P49862 253 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 FANCCQ00597 558 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 UBXN1Q04323 297 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ORC1Q13415 861 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 PSMD5Q16401 504 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 VARS2Q5ST30 1063 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 GBP6Q6ZN66 633 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 RRAGAQ7L523 313 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ADGRD2Q7Z7M1 963 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 RBM23Q86U06 439 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 METTL23Q86XA0 190 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ADGRF2Q8IZF7 708 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 APPL2Q8NEU8 664 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ARID3AQ99856 593 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 MRPL45Q9BRJ2 306 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 ANP32EQ9BTT0 268 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 MRPL17Q9NRX2 175 aaKnown RBP13.33□□□□□ -0.28
GABPB1-208ENST00000558970 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
GABPB1-208ENST00000558970 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 PER2O15055 1255 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 TEX33O43247 280 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 OR4Q2P0C623 313 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 FGFR3P22607 806 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 AARSP49588 968 aaKnown RBP eCLIP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 MCCD1P59942 119 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 YWHAHQ04917 246 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 UBE3AQ05086 875 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 SMC1AQ14683 1233 aaKnown RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 EXOC3L4Q17RC7 722 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 SOWAHAQ2M3V2 549 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 CTXN3Q4LDR2 81 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 GJB7Q6PEY0 223 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 OSTM1Q86WC4 334 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 ARHGEF19Q8IW93 802 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 RNF168Q8IYW5 571 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 EHBP1Q8NDI1 1231 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 NAP1L5Q96NT1 182 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 GAS2L1Q99501 681 aaPredicted RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 LSM14BQ9BX40 385 aaKnown RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 LZTS1Q9Y250 596 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 COQ4Q9Y3A0 265 aa13.32□□□□□ -0.28
GABPB1-208ENST00000558970 SPTBN5Q9NRC6 3674 aaKnown RBP13.32□□□□□ -0.28
GABPB1-208ENST00000558970 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 SYN3O14994 580 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 EFEMP2O95967 443 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 PDGFRBP09619 1106 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 CTSAP10619 480 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 P4HA1P13674 534 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms