RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 EVA1BQ9NVM1 165 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 HCFC1R1Q9NWW0 138 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 TUBGCP4Q9UGJ1 667 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 FBXL5Q9UKA1 691 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 MAFFQ9ULX9 164 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 UBQLN1Q9UMX0 589 aaKnown RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 MRPS23Q9Y3D9 190 aaKnown RBP8.77□□□□□ -1.01
TRAF3-205ENST00000558700 INSL5Q9Y5Q6 135 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 PATJQ8NI35 1801 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 ANK1P16157 1881 aa8.77□□□□□ -1.01
TRAF3-205ENST00000558700 NOTCH4Q99466 2003 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 TCHHQ07283 1943 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 TTC26A0AVF1 554 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ARHGEF37A1IGU5 675 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 WDR27A2RRH5 827 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 KRBA1A5PL33 1030 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 PROB1E7EW31 1015 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 RHOP08100 348 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ATF2P15336 505 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 CYP3A5P20815 502 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 LRPAP1P30533 357 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ARPP19P56211 112 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 PFKPQ01813 784 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ANGPT1Q15389 498 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 SF3A1Q15459 793 aaKnown RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 SWI5Q1ZZU3 235 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 SLC10A6Q3KNW5 377 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 MSS51Q4VC12 460 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 SEZ6Q53EL9 994 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ARSHQ5FYA8 562 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 PHLDB3Q6NSJ2 640 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 PARM1Q6UWI2 310 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 DTWD2Q8NBA8 298 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ITFG1Q8TB96 612 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ING5Q8WYH8 240 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 FGF14Q92915 247 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 THAP11Q96EK4 314 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 SHDQ96IW2 340 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 MSTO1Q9BUK6 570 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 OXCT2Q9BYC2 517 aaPredicted RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 ZHX3Q9H4I2 956 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 RPF1Q9H9Y2 349 aaKnown RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 AVENQ9NQS1 362 aaPredicted RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 GDE1Q9NZC3 331 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 DNMT3BQ9UBC3 853 aaKnown RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 STK17AQ9UEE5 414 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 AFF4Q9UHB7 1163 aaKnown RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
TRAF3-205ENST00000558700 TBX20Q9UMR3 447 aa8.76□□□□□ -1.01
TRAF3-205ENST00000558700 COL4A2P08572 1712 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 ZNF197O14709 1029 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 MEFVO15553 781 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 PI15O43692 258 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 TBC1D4O60343 1298 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 ABLIM3O94929 683 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 PAX3P23760 479 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 IGFBP6P24592 240 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 MARCKSP29966 332 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 TNFSF9P41273 254 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 AARSP49588 968 aaKnown RBP eCLIP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 PRKCQQ04759 706 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 YWHAHQ04917 246 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 PLD1Q13393 1074 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 MRPL58Q14197 206 aaKnown RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 ENOX2Q16206 610 aaKnown RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 IQCEQ6IPM2 695 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 PDZD4Q76G19 769 aaPredicted RBP8.75□□□□□ -1.01
TRAF3-205ENST00000558700 USP37Q86T82 979 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 CD302Q8IX05 232 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 TCEAL8Q8IYN2 117 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 LEMD2Q8NC56 503 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 BEST2Q8NFU1 509 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 PJA1Q8NG27 643 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 HVCN1Q96D96 273 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 KXD1Q9BQD3 176 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 CCSER1Q9C0I3 900 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 HAPLN2Q9GZV7 340 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 CYP4F11Q9HBI6 524 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 CCDC39Q9UFE4 941 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 YIPF1Q9Y548 306 aa8.75□□□□□ -1.01
TRAF3-205ENST00000558700 A0A0B4J269 797 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 PRR23AA6NEV1 266 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 OR6C75A6NL08 312 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 LACTBL1A8MY62 500 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 M0QZQ0 153 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 FAM189A1O60320 539 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 ECI2O75521 394 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 ODC1P11926 461 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 CEBPBP17676 345 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 PTPN2P17706 415 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 MAGEA9P43362 315 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 GRIN1Q05586 938 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 SPAG1Q07617 926 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 ADCY1Q08828 1119 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 DPYDQ12882 1025 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 RESTQ13127 1097 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 TMEM132DQ14C87 1099 aa8.74□□□□□ -1.01
TRAF3-205ENST00000558700 MLF2Q15773 248 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms