RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 DSEQ9UL01 958 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 NUMBLQ9Y6R0 609 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 MYO15AQ9UKN7 3530 aa16.75■□□□□ 0.27
CSHL1-208ENST00000558609 ZFHX2Q9C0A1 2572 aaPredicted RBP16.74■□□□□ 0.27
CSHL1-208ENST00000558609 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 GOLGA8IPA6NC78 632 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 GOLGA8JA6NMD2 632 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 MICAL2O94851 1124 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 VNN2O95498 520 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 OR4Q2P0C623 313 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 CLCN5P51795 746 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 SLC5A9Q2M3M2 681 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 PRSS36Q5K4E3 855 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 FAM26FQ5R3K3 315 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
CSHL1-208ENST00000558609 PARM1Q6UWI2 310 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 GPD1LQ8N335 351 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 ELMOD1Q8N336 334 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 FGF14Q92915 247 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 RPP25Q9BUL9 199 aaKnown RBP16.74■□□□□ 0.27
CSHL1-208ENST00000558609 MFSD1Q9H3U5 465 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 GDE1Q9NZC3 331 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 FBXL21Q9UKT6 434 aa16.74■□□□□ 0.27
CSHL1-208ENST00000558609 KPNA7A9QM74 516 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CYB561D2O14569 222 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 ZNF197O14709 1029 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CFHP08603 1231 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 SLFN14P0C7P3 912 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 NPR3P17342 541 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CMA1P23946 247 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 PNPLA4P41247 253 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 TFAMQ00059 246 aaKnown RBP16.73■□□□□ 0.27
CSHL1-208ENST00000558609 TWF1Q12792 350 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 SV2CQ496J9 727 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CENPPQ6IPU0 288 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 SIX5Q8N196 739 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 C1orf127Q8N9H9 656 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 LEO1Q8WVC0 666 aaPredicted RBP16.73■□□□□ 0.27
CSHL1-208ENST00000558609 ING5Q8WYH8 240 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 ZNF512Q96ME7 567 aaPredicted RBP16.73■□□□□ 0.27
CSHL1-208ENST00000558609 ZNF560Q96MR9 790 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CORO1BQ9BR76 489 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 BLZF1Q9H2G9 400 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 SLC2A4RGQ9NR83 387 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CEP72Q9P209 647 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 HSFX1Q9UBD0 423 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 CACNA1HO95180 2353 aa16.73■□□□□ 0.27
CSHL1-208ENST00000558609 UBE4BO95155 1302 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 ZNF233A6NK53 670 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 GFRA3O60609 400 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 CASP1P29466 404 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 AFMP43652 599 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 EPHA5P54756 1037 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 SNRPFP62306 86 aaKnown RBP16.72■□□□□ 0.27
CSHL1-208ENST00000558609 KRT85P78386 507 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 DUSP4Q13115 394 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 PLD1Q13393 1074 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 CUL4BQ13620 913 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 CYP4A22Q5TCH4 519 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 CEP57L1Q8IYX8 460 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 TMEM105Q8N8V8 129 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 LEMD2Q8NC56 503 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 ST13P5Q8NFI4 369 aaPredicted RBP16.72■□□□□ 0.27
CSHL1-208ENST00000558609 OR10T2Q8NGX3 314 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 CXorf38Q8TB03 319 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 PGLYRP2Q96PD5 576 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 TMEM209Q96SK2 561 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 CRISPLD1Q9H336 500 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 KIAA1586Q9HCI6 787 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 PDE11AQ9HCR9 933 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 SERTAD1Q9UHV2 236 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 ITGA11Q9UKX5 1188 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 YIPF1Q9Y548 306 aa16.72■□□□□ 0.27
CSHL1-208ENST00000558609 TSC2P49815 1807 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 MTMR11A4FU01 709 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 KRBA1A5PL33 1030 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 ACTN4O43707 911 aaKnown RBP16.71■□□□□ 0.27
CSHL1-208ENST00000558609 ITGB3P05106 788 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 CEBPBP17676 345 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 POLR2BP30876 1174 aaKnown RBP16.71■□□□□ 0.27
CSHL1-208ENST00000558609 SURF1Q15526 300 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 WSCD1Q658N2 575 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 CWF19L1Q69YN2 538 aaKnown RBP16.71■□□□□ 0.27
CSHL1-208ENST00000558609 POTEHQ6S545 545 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 PDZD4Q76G19 769 aaPredicted RBP16.71■□□□□ 0.27
CSHL1-208ENST00000558609 THEM5Q8N1Q8 247 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 FLCNQ8NFG4 579 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 GPR152Q8TDT2 470 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 NOC3LQ8WTT2 800 aaKnown RBP16.71■□□□□ 0.27
CSHL1-208ENST00000558609 MCRS1Q96EZ8 462 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 SPATA32Q96LK8 384 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 RTP3Q9BQQ7 232 aa16.71■□□□□ 0.27
CSHL1-208ENST00000558609 ZCWPW1Q9H0M4 648 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms