RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 BORCS6Q96GS4 357 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 UROC1Q96N76 676 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 NECTIN4Q96NY8 510 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 TCF25Q9BQ70 676 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 SEMA4AQ9H3S1 761 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 ADAM28Q9UKQ2 775 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 DOCK8Q8NF50 2099 aa16.77■□□□□ 0.27
LINC01220-201ENST00000558575 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
LINC01220-201ENST00000558575 FAM208BQ5VWN6 2430 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 PIRO00625 290 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 LILRB3O75022 631 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 TADA2AO75478 443 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 B3GAT3O94766 335 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 TFAMQ00059 246 aaKnown RBP16.76■□□□□ 0.27
LINC01220-201ENST00000558575 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 FUT10Q6P4F1 479 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 TDRD5Q8NAT2 981 aaKnown RBP16.76■□□□□ 0.27
LINC01220-201ENST00000558575 FEZF2Q8TBJ5 459 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 CCDC127Q96BQ5 260 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 ZBP1Q9H171 429 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 CHST7Q9NS84 486 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 DPP3Q9NY33 737 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 PUF60Q9UHX1 559 aaKnown RBP16.76■□□□□ 0.27
LINC01220-201ENST00000558575 HCFC2Q9Y5Z7 792 aa16.76■□□□□ 0.27
LINC01220-201ENST00000558575 I3L4J1 428 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 PSMA7O14818 248 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 RPL13P26373 211 aaKnown RBP16.75■□□□□ 0.27
LINC01220-201ENST00000558575 PPP1R2P41236 205 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 BRCC3P46736 316 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 STX17P56962 302 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 NLRP12P59046 1061 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 DLG4P78352 724 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 CLDN10P78369 228 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 SURF1Q15526 300 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 RSPO4Q2I0M5 234 aaPredicted RBP16.75■□□□□ 0.27
LINC01220-201ENST00000558575 DPCR1Q3MIW9 517 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 CCDC183Q5T5S1 534 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 KIAA0319Q5VV43 1072 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 CEP135Q66GS9 1140 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 CES5AQ6NT32 575 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 C1orf127Q8N9H9 656 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 BEST2Q8NFU1 509 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 AUTS2Q8WXX7 1259 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 B3GALT6Q96L58 329 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 ENTPD7Q9NQZ7 604 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 SIX4Q9UIU6 781 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 CTNND2Q9UQB3 1225 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 ANK1P16157 1881 aa16.75■□□□□ 0.27
LINC01220-201ENST00000558575 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
LINC01220-201ENST00000558575 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
LINC01220-201ENST00000558575 MAPK13O15264 365 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 SPTLC1O15269 473 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 CXCL14O95715 111 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 SOD2P04179 222 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 DLATP10515 647 aaKnown RBP16.74■□□□□ 0.27
LINC01220-201ENST00000558575 CTSAP10619 480 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 FKBP3Q00688 224 aaKnown RBP16.74■□□□□ 0.27
LINC01220-201ENST00000558575 LRRC63Q05C16 580 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 ITIH3Q06033 890 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 STIM1Q13586 685 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 FOXR2Q6PJQ5 311 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 TMC7Q7Z402 723 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 MRPL43Q8N983 215 aaKnown RBP16.74■□□□□ 0.27
LINC01220-201ENST00000558575 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
LINC01220-201ENST00000558575 CASP10Q92851 521 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 HINFPQ9BQA5 517 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 RTP3Q9BQQ7 232 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 HERC2P3Q9BVR0 1158 aa16.74■□□□□ 0.27
LINC01220-201ENST00000558575 C2orf71A6NGG8 1288 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 CETN3O15182 167 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 XPOTO43592 962 aaKnown RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 CST3P01034 146 aaPredicted RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 PSMC2P35998 433 aaKnown RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 MTHFRP42898 656 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 AARSP49588 968 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 PAK1Q13153 545 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 ST3GAL2Q16842 350 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 DUOXA2Q1HG44 320 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 FAM171A1Q5VUB5 890 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 WDR49Q8IV35 697 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 FAM186BQ8IYM0 893 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 SIX5Q8N196 739 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 C12orf76Q8N812 135 aaPredicted RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 TMC2Q8TDI7 906 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 CGRRF1Q99675 332 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 TSG101Q99816 390 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 MTMR12Q9C0I1 747 aa16.73■□□□□ 0.27
LINC01220-201ENST00000558575 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms