RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 FAM50BQ9Y247 325 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 NCOR1O75376 2440 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 BICDL2A1A5D9 508 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 TBC1D4O60343 1298 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 PHACTR2O75167 634 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 OAZ2O95190 189 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 C1RP00736 705 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 CYP11A1P05108 521 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 EPB41P11171 864 aaKnown RBP13.3□□□□□ -0.28
SMAD3-205ENST00000558428 BMP1P13497 986 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 IL9P15248 144 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 VAMP7P51809 220 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 AP3M2P53677 418 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 ROR1Q01973 937 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 BIRC3Q13489 604 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 TRPC3Q13507 836 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 RAB33AQ14088 237 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 RARS2Q5T160 578 aaKnown RBP13.3□□□□□ -0.28
SMAD3-205ENST00000558428 SLC8B1Q6J4K2 584 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 METTL23Q86XA0 190 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 NELFBQ8WX92 580 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 BORCS6Q96GS4 357 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 MKNK1Q9BUB5 465 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 S1PR5Q9H228 398 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 PLEKHA4Q9H4M7 779 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 FBXW11Q9UKB1 542 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
SMAD3-205ENST00000558428 SNX9Q9Y5X1 595 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
SMAD3-205ENST00000558428 DOCK6Q96HP0 2047 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 HUS1O60921 280 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 MBD3O95983 291 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-205ENST00000558428 TRIM49P0CI25 452 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 TRIM49CP0CI26 452 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 CPB1P15086 417 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 STX17P56962 302 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 CLDN10P78369 228 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 ITIH3Q06033 890 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 PAK1Q13153 545 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 LIN9Q5TKA1 542 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
SMAD3-205ENST00000558428 WSCD1Q658N2 575 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 CES5AQ6NT32 575 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 TMC5Q6UXY8 1006 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 ZC3H3Q8IXZ2 948 aaKnown RBP13.29□□□□□ -0.28
SMAD3-205ENST00000558428 HDAC7Q8WUI4 952 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 GDAP2Q9NXN4 497 aa13.29□□□□□ -0.28
SMAD3-205ENST00000558428 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 OR6C75A6NL08 312 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 IKBKBO14920 756 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 SLC16A3O15427 465 aaKnown RBP13.28□□□□□ -0.28
SMAD3-205ENST00000558428 CLSTN1O94985 981 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
SMAD3-205ENST00000558428 OR4Q2P0C623 313 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 SMAD2Q15796 467 aaKnown RBP13.28□□□□□ -0.28
SMAD3-205ENST00000558428 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 TTI2Q6NXR4 508 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 THEM5Q8N1Q8 247 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 DUSP9Q99956 384 aaKnown RBP13.28□□□□□ -0.28
SMAD3-205ENST00000558428 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-205ENST00000558428 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 MMRN2Q9H8L6 949 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
SMAD3-205ENST00000558428 TTC28Q96AY4 2481 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 CCDC195A0A1B0GUA6 201 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 RFPL2O75678 378 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ZMYND10O75800 440 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 C8AP07357 584 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ELF1P32519 619 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 GCLMP48507 274 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 MYL6P60660 151 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ENPEPQ07075 957 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 NCOA4Q13772 614 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ZACNQ401N2 412 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 TPGS2Q68CL5 300 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 FOXR2Q6PJQ5 311 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ADGRF2Q8IZF7 708 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 TMEM86AQ8N2M4 240 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 MLKLQ8NB16 471 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 CMASQ8NFW8 434 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-205ENST00000558428 SLC7A14Q8TBB6 771 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 FEZF2Q8TBJ5 459 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ADAMTS19Q8TE59 1207 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 SUSD6Q92537 303 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 SYAP1Q96A49 352 aaPredicted RBP13.27□□□□□ -0.29
SMAD3-205ENST00000558428 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 CEP63Q96MT8 703 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 TMEM209Q96SK2 561 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 MMS19Q96T76 1030 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 ZDHHC7Q9NXF8 308 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms