RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 STXBP5Q5T5C0 1151 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 ITIH5Q86UX2 942 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 TMC8Q8IU68 726 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 BEST2Q8NFU1 509 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 TMEM209Q96SK2 561 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 BHMT2Q9H2M3 363 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 SMOC1Q9H4F8 434 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 TMEM134Q9H6X4 195 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 ZMIZ1Q9ULJ6 1067 aa19.44■□□□□ 0.7
TSPAN3-204ENST00000558394 CTDNEP1O95476 244 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 OR4Q2P0C623 313 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 GABRR2P28476 465 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 HOXC13P31276 330 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 FOSBP53539 338 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 ELF2Q15723 593 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 PLA2G2CQ5R387 149 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 MPZL3Q6UWV2 235 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 GCNAQ96QF7 691 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 TARS2Q9BW92 718 aaKnown RBP19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 LRRC3Q9BY71 257 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 PTPRHQ9HD43 1115 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 KMT5AQ9NQR1 393 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 ATG2BQ96BY7 2078 aa19.43■□□□□ 0.7
TSPAN3-204ENST00000558394 OR6C75A6NL08 312 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 C1QTNF9BB2RNN3 333 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 OAZ2O95190 189 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 OR52Z1P0C646 297 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 C1QTNF9P0C862 333 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 CCT6AP40227 531 aaKnown RBP19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 NPTX2P47972 431 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 AMPD2Q01433 879 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 TNK2Q07912 1038 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 FOXC1Q12948 553 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 DAB2IPQ5VWQ8 1189 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 DSTYKQ6XUX3 929 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 DNAJB7Q7Z6W7 309 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 CAMKK1Q8N5S9 505 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 EDEM2Q9BV94 578 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 DNAJC25Q9H1X3 360 aa19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 TIMM13Q9Y5L4 95 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-204ENST00000558394 RHOBTB1O94844 696 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 FDPSP14324 419 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 MCM2P49736 904 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 STRN3Q13033 797 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 GPR17Q13304 367 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 ANKRD1Q15327 319 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 SAFBQ15424 915 aaKnown RBP eCLIP19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 TAF12Q16514 161 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 PSMG2Q969U7 264 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 ZC3H10Q96K80 434 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 LRRC3BQ96PB8 259 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 SLC27A5Q9Y2P5 690 aa19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 RBM19Q9Y4C8 960 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.41■□□□□ 0.7
TSPAN3-204ENST00000558394 CEP295Q9C0D2 2601 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 M0QZQ0 153 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 MATR3P43243 847 aaKnown RBP eCLIP19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 CREB5Q02930 508 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 ZNF252P-AS1Q0IIN9 211 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 VEPH1Q14D04 833 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 ACAP1Q15027 740 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 ARMCX5Q6P1M9 558 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 GAREM2Q75VX8 874 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 EXOC4Q96A65 974 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 DRC1Q96MC2 740 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 TASP1Q9H6P5 420 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 TUBGCP4Q9UGJ1 667 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 KIAA1024Q9UPX6 916 aa19.4■□□□□ 0.7
TSPAN3-204ENST00000558394 EML5Q05BV3 1969 aa19.39■□□□□ 0.7
TSPAN3-204ENST00000558394 CDC25CP30307 473 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 MYBPC2Q14324 1141 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 NOLC1Q14978 699 aaKnown RBP eCLIP19.39■□□□□ 0.694e-6■□□□□ 8.2
TSPAN3-204ENST00000558394 KARSQ15046 597 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 PLK5Q496M5 336 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 OVOS1Q6IE37 1185 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 CENPPQ6IPU0 288 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 TCEAL6Q6IPX3 200 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 PKN3Q6P5Z2 889 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 TCEAL3Q969E4 200 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 MKNK1Q9BUB5 465 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 CRISPLD1Q9H336 500 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 GKN1Q9NS71 199 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 ARHGAP28Q9P2N2 729 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 FRYQ5TBA9 3013 aa19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 ZNF638Q14966 1978 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-204ENST00000558394 TMEM8BA6NDV4 472 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 C4orf47A7E2U8 309 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 XPOTO43592 962 aaKnown RBP19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 VNN2O95498 520 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 PRAMEF12O95522 483 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 CAVIN2O95810 425 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 PROZP22891 400 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 WEE1P30291 646 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 ZNF174Q15697 407 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 SLC10A6Q3KNW5 377 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 TMEM196Q5HYL7 178 aa19.38■□□□□ 0.69
TSPAN3-204ENST00000558394 NECAB1Q8N987 351 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms