RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NPY5RQ15761 445 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ITPRIPL2Q3MIP1 535 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 PLK5Q496M5 336 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ARHGAP15Q53QZ3 475 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 GLRA4Q5JXX5 417 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 SH3PXD2AQ5TCZ1 1133 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ATF7IP2Q5U623 682 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 CDCA2Q69YH5 1023 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 ZNF280DQ6N043 979 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 TXNDC11Q6PKC3 985 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 PIK3AP1Q6ZUJ8 805 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 NYAP1Q6ZVC0 841 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 GPIHBP1Q8IV16 184 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 SHKBP1Q8TBC3 707 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ZNF274Q96GC6 653 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 IFT74Q96LB3 600 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 EDEM2Q9BV94 578 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 CCDC94Q9BW85 323 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 SCNM1Q9BWG6 230 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 OXCT2Q9BYC2 517 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 ATXN3LQ9H3M9 355 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 GPRC5CQ9NQ84 441 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 TOPORSQ9NS56 1045 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 C2orf42Q9NWW7 574 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 GTSE1Q9NYZ3 720 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 KCNJ14Q9UNX9 436 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ASB3Q9Y575 518 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 USP24Q9UPU5 2620 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 PCNX2A6NKB5 2137 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ARID2Q68CP9 1835 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 A0A1W2PRU2 124 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 BCLAF3A2AJT9 711 aaKnown RBP5.67□□□□□ -1.5
SPG11-208ENST00000558155 K7ERI5 159 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 CDKL5O76039 1030 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 CPB1P15086 417 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 CYP11B2P19099 503 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 WEE1P30291 646 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 MCM4P33991 863 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 TXKP42681 527 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 NAMPTP43490 491 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 KARSQ15046 597 aaKnown RBP5.67□□□□□ -1.5
SPG11-208ENST00000558155 CALCRLQ16602 461 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 XKR4Q5GH76 650 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 BMP2KLQ5H9B9 411 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 EEF1DP3Q658K8 133 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 ALKAL1Q6UXT8 129 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 DNAJB7Q7Z6W7 309 aaPredicted RBP5.67□□□□□ -1.5
SPG11-208ENST00000558155 ITIH5Q86UX2 942 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 C11orf74Q86VG3 221 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 C3orf58Q8NDZ4 430 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 BPIFB1Q8TDL5 484 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 ZCCHC14Q8WYQ9 949 aaKnown RBP5.67□□□□□ -1.5
SPG11-208ENST00000558155 DDX12PQ92771 950 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 GATA6Q92908 595 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 COL26A1Q96A83 441 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 RSPRY1Q96DX4 576 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 ZFYVE19Q96K21 471 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 SUSD3Q96L08 255 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 LRRC3Q9BY71 257 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 DUSP15Q9H1R2 295 aaPredicted RBP5.67□□□□□ -1.5
SPG11-208ENST00000558155 SMOC1Q9H4F8 434 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 SLC32A1Q9H598 525 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 TASP1Q9H6P5 420 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 TTC12Q9H892 705 aaPredicted RBP5.67□□□□□ -1.5
SPG11-208ENST00000558155 GOLGA2P5Q9HBQ8 144 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 TUFT1Q9NNX1 390 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 TMEM9BQ9NQ34 198 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 GKN1Q9NS71 199 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 WASF3Q9UPY6 502 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 TNFSF13BQ9Y275 285 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 USP20Q9Y2K6 914 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 NEUROG3Q9Y4Z2 214 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 SNX14Q9Y5W7 946 aa5.67□□□□□ -1.5
SPG11-208ENST00000558155 ABCA7Q8IZY2 2146 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 COL4A2P08572 1712 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 THADAQ6YHU6 1953 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 NUP205Q92621 2012 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 ARHGEF35A5YM69 484 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TRDMT1O14717 391 aaKnown RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 OAZ2O95190 189 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 KCNE1P15382 129 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 SPINK2P20155 84 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 DRD1P21728 446 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 HOXC13P31276 330 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 GBP1P32455 592 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 HSPA4P34932 840 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 GRM5P41594 1212 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TUFMP49411 452 aaKnown RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 MCM2P49736 904 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 OSTNP61366 133 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 YWHAHQ04917 246 aaPredicted RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 SOX4Q06945 474 aaPredicted RBP5.66□□□□□ -1.5
SPG11-208ENST00000558155 TNK2Q07912 1038 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 DUSP4Q13115 394 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 GPR17Q13304 367 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 RUNX3Q13761 415 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 LAPTM4AQ15012 233 aa5.66□□□□□ -1.5
SPG11-208ENST00000558155 TAF12Q16514 161 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms