RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 OR4Q2P0C623 313 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 TYMPP19971 482 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 PIK3CAP42336 1068 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 VAMP7P51809 220 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 AP3M2P53677 418 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 MYL7Q01449 175 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 TSPY1Q01534 308 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 ROR1Q01973 937 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 ADCY1Q08828 1119 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 RAB33AQ14088 237 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 MYBPC2Q14324 1141 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 SMAD2Q15796 467 aaKnown RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 TPD52L1Q16890 204 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 CCDC40Q4G0X9 1142 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 TCERG1LQ5VWI1 586 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 INTS8Q75QN2 995 aaKnown RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 TRAPPC11Q7Z392 1133 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 CREBRFQ8IUR6 639 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 SLC9A9Q8IVB4 645 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 ELOA2Q8IYF1 753 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 HDAC7Q8WUI4 952 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 NELFBQ8WX92 580 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 SYAP1Q96A49 352 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 EEF2KMTQ96G04 330 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 PHF7Q9BWX1 381 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 OXCT2Q9BYC2 517 aaPredicted RBP9.66□□□□□ -0.86
SPG11-207ENST00000558138 IMPG2Q9BZV3 1241 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 ZDHHC7Q9NXF8 308 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 FBXW11Q9UKB1 542 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 NR2E1Q9Y466 385 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 PRUNE2Q8WUY3 3088 aa9.66□□□□□ -0.86
SPG11-207ENST00000558138 BRWD1Q9NSI6 2320 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 WDR27A2RRH5 827 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 TRIM49BA6NDI0 452 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 STX10O60499 249 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 ZMYND10O75800 440 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 TRIM49P0CI25 452 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 TRIM49CP0CI26 452 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 GBP2P32456 591 aaPredicted RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 AARSP49588 968 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPG11-207ENST00000558138 CDR1P51861 262 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 STX17P56962 302 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 FKBP3Q00688 224 aaKnown RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 LRRC63Q05C16 580 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 KCNC3Q14003 757 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 TAF12Q16514 161 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 ZNF699Q32M78 642 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 SLC39A12Q504Y0 691 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 WSCD1Q658N2 575 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 SLC8B1Q6J4K2 584 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 RSPO2Q6UXX9 243 aaPredicted RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 SCARA5Q6ZMJ2 495 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 C15orf39Q6ZRI6 1047 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 GET4Q7L5D6 327 aaPredicted RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 ADHFE1Q8IWW8 467 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 DCP1BQ8IZD4 617 aaKnown RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 ADGRF2Q8IZF7 708 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 GJD3Q8N144 294 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 TDRD5Q8NAT2 981 aaKnown RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 ZNF461Q8TAF7 563 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 FAM200AQ8TCP9 573 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 DHTKD1Q96HY7 919 aaPredicted RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 MFSD14AQ96MC6 490 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 SEPT5Q99719 369 aaPredicted RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 S1PR5Q9H228 398 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 SNX25Q9H3E2 840 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 CLSTN2Q9H4D0 955 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 DMAC2Q9NW81 257 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.86
SPG11-207ENST00000558138 PRKAG3Q9UGI9 489 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 CDH22Q9UJ99 828 aa9.65□□□□□ -0.86
SPG11-207ENST00000558138 REV3LO60673 3130 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 TNFRSF10AO00220 468 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 AKAP3O75969 853 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 OAZ2O95190 189 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 FGFR1OPO95684 399 aaKnown RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 HNRNPA1P09651 372 aaKnown RBP eCLIP9.64□□□□□ -0.87
SPG11-207ENST00000558138 P4HA1P13674 534 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 TRIM21P19474 475 aaKnown RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 CCNE1P24864 410 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 ALDH1A3P47895 512 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 MYL6P60660 151 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 DLG4P78352 724 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 PAK1Q13153 545 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 PLD1Q13393 1074 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 NCOA4Q13772 614 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 MORC3Q14149 939 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 NFIL3Q16649 462 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 WDR72Q3MJ13 1102 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 MGAT5BQ3V5L5 792 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 TDRD10Q5VZ19 366 aaKnown RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 TPGS2Q68CL5 300 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 ANKRD40Q6AI12 368 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 IQCEQ6IPM2 695 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 GPR149Q86SP6 731 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 ADSSL1Q8N142 457 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms