RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TMEM189-UBE2V1I3L0A0 370 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 SPTLC1O15269 473 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 CYP26A1O43174 497 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 DDHD2O94830 711 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 FAM163BP0C2L3 166 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 ANXA13P27216 316 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 CYLC1P35663 651 aaPredicted RBP18.03■□□□□ 0.48
SNX1-203ENST00000558040 OR1G1P47890 313 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 PDE6CP51160 858 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 PTK2Q05397 1052 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
SNX1-203ENST00000558040 TMEM240Q5SV17 173 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 DSTYKQ6XUX3 929 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 RBBP8NLQ8NC74 664 aaPredicted RBP18.03■□□□□ 0.48
SNX1-203ENST00000558040 HERVK_113Q902F9 699 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 CCDC42Q96M95 316 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 NRDE2Q9H7Z3 1164 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 NHEJ1Q9H9Q4 299 aaPredicted RBP18.03■□□□□ 0.48
SNX1-203ENST00000558040 ARHGAP20Q9P2F6 1191 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 CACNG4Q9UBN1 327 aa18.03■□□□□ 0.48
SNX1-203ENST00000558040 CARNS1A5YM72 827 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 SOWAHDA6NJG2 315 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 CYB561D2O14569 222 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 TACC1O75410 805 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 SCN1AP35498 2009 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 RAP1GAPP47736 663 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 AARSP49588 968 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNX1-203ENST00000558040 INCA1Q0VD86 236 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 PAN2Q504Q3 1202 aaKnown RBP18.02■□□□□ 0.48
SNX1-203ENST00000558040 HGSNATQ68CP4 663 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 GPIHBP1Q8IV16 184 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 CMTR2Q8IYT2 770 aaKnown RBP18.02■□□□□ 0.48
SNX1-203ENST00000558040 CHP1Q99653 195 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.02■□□□□ 0.483e-7■■□□□ 11.8
SNX1-203ENST00000558040 PAAF1Q9BRP4 392 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 SDCBP2Q9H190 292 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 HAUS4Q9H6D7 363 aa18.02■□□□□ 0.48
SNX1-203ENST00000558040 BARX2Q9UMQ3 279 aaPredicted RBP18.02■□□□□ 0.48
SNX1-203ENST00000558040 FNDC1Q4ZHG4 1894 aaPredicted RBP18.01■□□□□ 0.47
SNX1-203ENST00000558040 TRAPPC3O43617 180 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 CILPO75339 1184 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 KIF4AO95239 1232 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 IPO7O95373 1038 aaKnown RBP18.01■□□□□ 0.47
SNX1-203ENST00000558040 ALDH2P05091 517 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 ODC1P11926 461 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 CLCN1P35523 988 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 EIF4A3P38919 411 aaKnown RBP18.01■□□□□ 0.47
SNX1-203ENST00000558040 ZNF132P52740 706 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 EPHB4P54760 987 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 CDH8P55286 799 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 SOWAHAQ2M3V2 549 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 ADGRF2Q8IZF7 708 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 TMEM86AQ8N2M4 240 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 C3orf58Q8NDZ4 430 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 RABGGTAQ92696 567 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 ZNF689Q96CS4 500 aaPredicted RBP18.01■□□□□ 0.47
SNX1-203ENST00000558040 SENP8Q96LD8 212 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 SLC9A7Q96T83 725 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 SNX25Q9H3E2 840 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 DNAJB4Q9UDY4 337 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 DSEQ9UL01 958 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 FAN1Q9Y2M0 1017 aa18.01■□□□□ 0.47
SNX1-203ENST00000558040 AKR1B10O60218 316 aa18■□□□□ 0.47
SNX1-203ENST00000558040 B4GALT3O60512 393 aa18■□□□□ 0.47
SNX1-203ENST00000558040 PAEPP09466 180 aa18■□□□□ 0.47
SNX1-203ENST00000558040 CYP11B1P15538 503 aa18■□□□□ 0.47
SNX1-203ENST00000558040 BTG3Q14201 252 aaPredicted RBP18■□□□□ 0.47
SNX1-203ENST00000558040 FAM117BQ6P1L5 589 aa18■□□□□ 0.47
SNX1-203ENST00000558040 LIMS2Q7Z4I7 341 aa18■□□□□ 0.47
SNX1-203ENST00000558040 UNC93AQ86WB7 457 aa18■□□□□ 0.47
SNX1-203ENST00000558040 METTL23Q86XA0 190 aa18■□□□□ 0.47
SNX1-203ENST00000558040 ZNF677Q86XU0 584 aa18■□□□□ 0.47
SNX1-203ENST00000558040 PHOSPHO2Q8TCD6 241 aa18■□□□□ 0.47
SNX1-203ENST00000558040 EPS8L1Q8TE68 723 aa18■□□□□ 0.47
SNX1-203ENST00000558040 SUSD3Q96L08 255 aa18■□□□□ 0.47
SNX1-203ENST00000558040 NT5C1AQ9BXI3 368 aa18■□□□□ 0.47
SNX1-203ENST00000558040 PCDH10Q9P2E7 1040 aa18■□□□□ 0.47
SNX1-203ENST00000558040 L1RE1Q9UN81 338 aa18■□□□□ 0.47
SNX1-203ENST00000558040 ZKSCAN5Q9Y2L8 839 aa18■□□□□ 0.47
SNX1-203ENST00000558040 PRG3Q9Y2Y8 225 aaPredicted RBP18■□□□□ 0.47
SNX1-203ENST00000558040 SLC4A7Q9Y6M7 1214 aa18■□□□□ 0.47
SNX1-203ENST00000558040 NRP1O14786 923 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 TADA2AO75478 443 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 PLEKP08567 350 aaPredicted RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 WARSP23381 471 aaKnown RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 GNA15P30679 374 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 ALDH7A1P49419 539 aaKnown RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 KIF11P52732 1056 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 NDST1P52848 882 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 BMS1Q14692 1282 aaKnown RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 TIGD5Q53EQ6 642 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 RAD9BQ6WBX8 426 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 ZNF571Q7Z3V5 609 aaPredicted RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 SLC47A2Q86VL8 602 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 OR6B3Q8NGW1 331 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 TMEM176AQ96HP8 235 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms