RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RSPRY1Q96DX4 576 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 RPF1Q9H9Y2 349 aaKnown RBP17.33■□□□□ 0.36
SCFD1-224ENST00000557713 LMAN1LQ9HAT1 526 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 BLOC1S4Q9NUP1 217 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 NCDNQ9UBB6 729 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 PIAS3Q9Y6X2 628 aa17.33■□□□□ 0.36
SCFD1-224ENST00000557713 A0A1W2PRU2 124 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 MED19A0JLT2 244 aaPredicted RBP17.32■□□□□ 0.36
SCFD1-224ENST00000557713 H3BQV1 296 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 HNRNPDLO14979 420 aaKnown RBP17.32■□□□□ 0.36
SCFD1-224ENST00000557713 XPOTO43592 962 aaKnown RBP17.32■□□□□ 0.36
SCFD1-224ENST00000557713 EPHB3P54753 998 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 LILRA4P59901 499 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 MYBPC2Q14324 1141 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 OVOS1Q6IE37 1185 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 SLC39A4Q6P5W5 647 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 CD302Q8IX05 232 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 MYCT1Q8N699 235 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 GPR161Q8N6U8 529 aaKnown RBP17.32■□□□□ 0.36
SCFD1-224ENST00000557713 IER2Q9BTL4 223 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 CPSF3Q9UKF6 684 aaKnown RBP17.32■□□□□ 0.36
SCFD1-224ENST00000557713 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
SCFD1-224ENST00000557713 SLC27A5Q9Y2P5 690 aa17.32■□□□□ 0.36
SCFD1-224ENST00000557713 MTMR11A4FU01 709 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 PIRO00625 290 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 CHADO15335 359 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 TRAK2O60296 914 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 CHRNB1P11230 501 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 PAX3P23760 479 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 UBA7P41226 1012 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 FCHO2Q0JRZ9 810 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
SCFD1-224ENST00000557713 JADE1Q6IE81 842 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 DNAJB7Q7Z6W7 309 aaPredicted RBP17.31■□□□□ 0.36
SCFD1-224ENST00000557713 ATAD1Q8NBU5 361 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 CALML4Q96GE6 196 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 SENP8Q96LD8 212 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 TMEM209Q96SK2 561 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 FIZ1Q96SL8 496 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 MSTO1Q9BUK6 570 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 PARVGQ9HBI0 331 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 HSFX1Q9UBD0 423 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 ASB3Q9Y575 518 aa17.31■□□□□ 0.36
SCFD1-224ENST00000557713 GPR179Q6PRD1 2367 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 TICRRQ7Z2Z1 1910 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 K7ENM7 598 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 FAM13AO94988 1023 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
SCFD1-224ENST00000557713 TGM1P22735 817 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 CCNE1P24864 410 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 NRLP54845 237 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 GTF2BQ00403 316 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
SCFD1-224ENST00000557713 MCM6Q14566 821 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 C9orf57Q5W0N0 161 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 GAREM2Q75VX8 874 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 ARID3BQ8IVW6 561 aaPredicted RBP17.3■□□□□ 0.36
SCFD1-224ENST00000557713 PSMG2Q969U7 264 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 SLITRK6Q9H5Y7 841 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 DERAQ9Y315 318 aa17.3■□□□□ 0.36
SCFD1-224ENST00000557713 ANO9A1A5B4 782 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 ANKRD63C9JTQ0 380 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 CYP11A1P05108 521 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 ODC1P11926 461 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 NMT1P30419 496 aaKnown RBP17.29■□□□□ 0.36
SCFD1-224ENST00000557713 CCR3P51677 355 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 GRIN1Q05586 938 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 GAS6Q14393 721 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 ARMCX5Q6P1M9 558 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 YAF2Q8IY57 180 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 TTC9BQ8N6N2 239 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 CSGALNACT1Q8TDX6 532 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 RAD54LQ92698 747 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 SECISBP2LQ93073 1101 aaKnown RBP17.29■□□□□ 0.36
SCFD1-224ENST00000557713 LRRC3BQ96PB8 259 aa17.29■□□□□ 0.36
SCFD1-224ENST00000557713 SOAT2O75908 522 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 FGF19O95750 216 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 NFICP08651 508 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 PLCG1P19174 1290 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 LONP1P36776 959 aaKnown RBP17.28■□□□□ 0.36
SCFD1-224ENST00000557713 PPP2R5DQ14738 602 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
SCFD1-224ENST00000557713 OR10T2Q8NGX3 314 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 MSANTD3Q96H12 275 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 ASB7Q9H672 318 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 C8orf33Q9H7E9 229 aaPredicted RBP17.28■□□□□ 0.36
SCFD1-224ENST00000557713 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
SCFD1-224ENST00000557713 KRT18P05783 430 aaKnown RBP17.27■□□□□ 0.36
SCFD1-224ENST00000557713 SDHBP21912 280 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 WEE1P30291 646 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 ABCD1P33897 745 aa17.27■□□□□ 0.36
SCFD1-224ENST00000557713 CXCL12P48061 93 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms