RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GEMIN4P57678 1058 aaKnown RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 NKX6-1P78426 367 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 MGAT5Q09328 741 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 FZD5Q13467 585 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 PMS2P11Q13670 270 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 SIM2Q14190 667 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 STARD3Q14849 445 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 CCDC178Q5BJE1 867 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 RGMBQ6NW40 437 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 PGBD2Q6P3X8 592 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 HEATR3Q7Z4Q2 680 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 ATG4DQ86TL0 474 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 GLB1L2Q8IW92 636 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 USP38Q8NB14 1042 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 PDZD8Q8NEN9 1154 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 WDR48Q8TAF3 677 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 ZSCAN18Q8TBC5 510 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 ANKS1AQ92625 1134 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 TOE1Q96GM8 510 aaKnown RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 CLPTM1LQ96KA5 538 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 EIF2AK1Q9BQI3 630 aaKnown RBP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 PRDM7Q9NQW5 492 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 TDP1Q9NUW8 608 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 GALNT8Q9NY28 637 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 DTLQ9NZJ0 730 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 BCCIPQ9P287 314 aaKnown RBP eCLIP5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 CPA4Q9UI42 421 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 USP24Q9UPU5 2620 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 CEP83Q9Y592 693 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 WNK3Q9BYP7 1800 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 CPDO75976 1380 aa5.78□□□□□ -1.48
MTHFD1-216ENST00000557539 MAP1BP46821 2468 aaKnown RBP5.77□□□□□ -1.48
MTHFD1-216ENST00000557539 LY75O60449 1722 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 FITM1A5D6W6 292 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 M0R3H8 397 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 DDX3XO00571 662 aaKnown RBP eCLIP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 FGF18O76093 207 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 IL18RAPO95256 599 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 PARP1P09874 1014 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 BRAFP15056 766 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 HMGB2P26583 209 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 APEX1P27695 318 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 GALK1P51570 392 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 JAG1P78504 1218 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 FMO1Q01740 532 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 PFKPQ01813 784 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 PLS1Q14651 629 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 SEPT2Q15019 361 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 KHDC1Q4VXA5 237 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 KLHDC7AQ5VTJ3 777 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM180AQ6UWF9 173 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM129CQ86XR2 697 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 ZNF527Q8NB42 609 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 PPHLN1Q8NEY8 458 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 GPR156Q8NFN8 814 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 TMEM41AQ96HV5 264 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 FDXACB1Q9BRP7 624 aaPredicted RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 UNKQ9C0B0 810 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 RRN3Q9NYV6 651 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 RBPJLQ9UBG7 517 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 GPR160Q9UJ42 338 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 SCINQ9Y6U3 715 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 INSRP06213 1382 aa5.77□□□□□ -1.49
MTHFD1-216ENST00000557539 XIRP2A4UGR9 3374 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 ABCC6O95255 1503 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 ZNF839A8K0R7 811 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 F8W8V4 182 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 BIN1O00499 593 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 APOL1O14791 398 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 SRGAP3O43295 1099 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 SGTAO43765 313 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 AKR1B10O60218 316 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 CSTBP04080 98 aaKnown RBP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 CYBBP04839 570 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 ENO2P09104 434 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 HARSP12081 509 aaKnown RBP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 TYRP14679 529 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 SYN1P17600 705 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 ADSLP30566 484 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 TMF1P82094 1093 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 MRPS5P82675 430 aaKnown RBP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 NFATC3Q12968 1075 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 PPFIA1Q13136 1202 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 DAG1Q14118 895 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 CNGA2Q16280 664 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 PAQR3Q6TCH7 311 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 RSPH3Q86UC2 560 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 NLRX1Q86UT6 975 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 SESTD1Q86VW0 696 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 BRI3BPQ8WY22 251 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 FAM168AQ92567 244 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 TBC1D20Q96BZ9 403 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 LTV1Q96GA3 475 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 ZNF333Q96JL9 665 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 TBATAQ96M53 351 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 DMRTA2Q96SC8 542 aa5.76□□□□□ -1.49
MTHFD1-216ENST00000557539 VRK1Q99986 396 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms