RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TRMT13Q9NUP7 481 aaKnown RBP13.31□□□□□ -0.28
SHMT2-233ENST00000557529 FAM105AQ9NUU6 356 aa13.31□□□□□ -0.28
SHMT2-233ENST00000557529 CEP83Q9Y592 693 aa13.31□□□□□ -0.28
SHMT2-233ENST00000557529 CES2O00748 559 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 NCK2O43639 380 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 BUB1BO60566 1050 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-233ENST00000557529 SRGAP2O75044 1071 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 CILPO75339 1184 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 CALCAP01258 141 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 SKIP12755 728 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 ITGA4P13612 1032 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 NOMO3P69849 1222 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 INCA1Q0VD86 236 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 GLRA4Q5JXX5 417 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 C11orf63Q6NUN7 778 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 RSRC2Q7L4I2 434 aaKnown RBP13.3□□□□□ -0.28
SHMT2-233ENST00000557529 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-233ENST00000557529 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 LRRN4CLQ8ND94 238 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 CYFIP2Q96F07 1278 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 ZNF560Q96MR9 790 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 OSGEPQ9NPF4 335 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 SLC38A7Q9NVC3 462 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
SHMT2-233ENST00000557529 TUBGCP4Q9UGJ1 667 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 AMFRQ9UKV5 643 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-233ENST00000557529 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
SHMT2-233ENST00000557529 ARVCFO00192 962 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 KIF4AO95239 1232 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 GHRP10912 638 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 CD19P15391 556 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 BRD2P25440 801 aaKnown RBP13.29□□□□□ -0.28
SHMT2-233ENST00000557529 CD52P31358 61 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 PAFAH1B1P43034 410 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 RAP1GAPP47736 663 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 RAD23BP54727 409 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
SHMT2-233ENST00000557529 LPIN1Q14693 890 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 MRPL10Q7Z7H8 261 aaKnown RBP13.29□□□□□ -0.28
SHMT2-233ENST00000557529 NT5DC3Q86UY8 548 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 CREG2Q8IUH2 290 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-233ENST00000557529 CPA5Q8WXQ8 436 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 RABGGTAQ92696 567 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-233ENST00000557529 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 PBKQ96KB5 322 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 CAPZA3Q96KX2 299 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 NUP85Q9BW27 656 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 DNAI2Q9GZS0 605 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 SDCBP2Q9H190 292 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 CXCL16Q9H2A7 254 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 AGO3Q9H9G7 860 aaKnown RBP13.29□□□□□ -0.28
SHMT2-233ENST00000557529 ABCB6Q9NP58 842 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 KLK14Q9P0G3 267 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 PADI3Q9ULW8 664 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 COG5Q9UP83 839 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 PTPN22Q9Y2R2 807 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
SHMT2-233ENST00000557529 DNM1LO00429 736 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 PIRO00625 290 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 ZNF623O75123 536 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 CALB1P05937 261 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 VDRP11473 427 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 CDH5P33151 784 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-233ENST00000557529 CDH8P55286 799 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 ITIH3Q06033 890 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 DSC3Q14574 896 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 ERCC6LQ2NKX8 1250 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 TEX35Q5T0J7 233 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 CCDC181Q5TID7 509 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 ZNF572Q7Z3I7 529 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-233ENST00000557529 PASD1Q8IV76 773 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 SLC4A11Q8NBS3 891 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 SH3TC2Q8TF17 1288 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 WHAMMQ8TF30 809 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 COG1Q8WTW3 980 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 TSC1Q92574 1164 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 RPS6KC1Q96S38 1066 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 SELENOOQ9BVL4 669 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 MRPL47Q9HD33 250 aaKnown RBP13.28□□□□□ -0.28
SHMT2-233ENST00000557529 MYH10P35580 1976 aa13.28□□□□□ -0.28
SHMT2-233ENST00000557529 MIF4GDA9UHW6 222 aaKnown RBP13.27□□□□□ -0.29
SHMT2-233ENST00000557529 ZNF185O15231 689 aa13.27□□□□□ -0.29
SHMT2-233ENST00000557529 CFHP08603 1231 aa13.27□□□□□ -0.29
SHMT2-233ENST00000557529 CKBP12277 381 aa13.27□□□□□ -0.29
SHMT2-233ENST00000557529 MMP8P22894 467 aa13.27□□□□□ -0.29
SHMT2-233ENST00000557529 LRPAP1P30533 357 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms