RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PREPLQ4J6C6 727 aaPredicted RBP5.59□□□□□ -1.51
VRK1-207ENST00000557352 KHDC1Q4VXA5 237 aaKnown RBP5.59□□□□□ -1.51
VRK1-207ENST00000557352 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
VRK1-207ENST00000557352 MICALCLQ6ZW33 695 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 AOPEPQ8N6M6 819 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 MYCBPAPQ8TBZ2 947 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 SNX19Q92543 992 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 MTMR8Q96EF0 704 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 PGBD1Q96JS3 809 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 VRK1Q99986 396 aaPredicted RBP5.59□□□□□ -1.51
VRK1-207ENST00000557352 VKORC1Q9BQB6 163 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 ADM5C9JUS6 153 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 E7ENX8 843 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 INO80B-WBP1J3KQ70 363 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 F2RL2O00254 374 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 CDK4P11802 303 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 PPP3CBP16298 524 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 MALP21145 153 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 HNRNPMP52272 730 aaKnown RBP eCLIP5.58□□□□□ -1.52
VRK1-207ENST00000557352 DSC2Q02487 901 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 TAP2Q03519 686 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 FOXF2Q12947 444 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 SNAPC2Q13487 334 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 ODF1Q14990 250 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 UAP1L1Q3KQV9 507 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 EFCAB2Q5VUJ9 269 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 TAPT1Q6NXT6 567 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 TTC7BQ86TV6 843 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 TRIB1Q96RU8 372 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 INO80BQ9C086 356 aaPredicted RBP5.58□□□□□ -1.52
VRK1-207ENST00000557352 CPNE5Q9HCH3 593 aa5.58□□□□□ -1.52
VRK1-207ENST00000557352 CFAP20Q9Y6A4 193 aaKnown RBP5.58□□□□□ -1.52
VRK1-207ENST00000557352 NT5C1B-RDH14C9J2C7 533 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 CHRM2P08172 466 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 WT1P19544 449 aaPredicted RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 ADKP55263 362 aaKnown RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 PROK1P58294 105 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 AMPD3Q01432 767 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 FAM50AQ14320 339 aaKnown RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 TXNRD1Q16881 649 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 CCDC93Q567U6 631 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 ZNF788Q6ZQV5 615 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 PNMA8AQ86V59 439 aaPredicted RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 PDSS2Q86YH6 399 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 SRRM1Q8IYB3 904 aaKnown RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 POC1BQ8TC44 478 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 SARAFQ96BY9 339 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 SMOQ99835 787 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 MAN1C1Q9NR34 630 aa5.57□□□□□ -1.52
VRK1-207ENST00000557352 SIDT1Q9NXL6 827 aaKnown RBP5.57□□□□□ -1.52
VRK1-207ENST00000557352 TNKSO95271 1327 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 WDR27A2RRH5 827 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 LPOP22079 712 aaPredicted RBP5.56□□□□□ -1.52
VRK1-207ENST00000557352 CYP2C19P33261 490 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 NPTX2P47972 431 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 PTPN21Q16825 1174 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 TSTD2Q5T7W7 516 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 SLC4A10Q6U841 1118 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 SH2D3CQ8N5H7 860 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 B3GALNT2Q8NCR0 500 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 FBXO41Q8TF61 875 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 SCAMP4Q969E2 229 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 SLC13A1Q9BZW2 595 aa5.56□□□□□ -1.52
VRK1-207ENST00000557352 SETD1BQ9UPS6 1966 aaKnown RBP5.56□□□□□ -1.52
VRK1-207ENST00000557352 LINC00473A8K010 186 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 VWC2LB2RUY7 222 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 POLRMTO00411 1230 aaKnown RBP5.55□□□□□ -1.52
VRK1-207ENST00000557352 GPD1P21695 349 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 ATXN1P54253 815 aaKnown RBP5.55□□□□□ -1.52
VRK1-207ENST00000557352 NXPH1P58417 271 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 EVA1CP58658 441 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 KRTAP10-11P60412 298 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 ITIH3Q06033 890 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 SLC30A10Q6XR72 485 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 FAM9AQ8IZU1 332 aaPredicted RBP5.55□□□□□ -1.52
VRK1-207ENST00000557352 BRD9Q9H8M2 597 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 KLC4Q9NSK0 619 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 RLIMQ9NVW2 624 aa5.55□□□□□ -1.52
VRK1-207ENST00000557352 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.55□□□□□ -1.52
VRK1-207ENST00000557352 SPATA31A3Q5VYP0 1347 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 LRRC14BA6NHZ5 514 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 CGB1A6NKQ9 187 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 ZNF785A8K8V0 405 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 ALG1L2C9J202 215 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 ZRANB2O95218 330 aaKnown RBP eCLIP5.54□□□□□ -1.52
VRK1-207ENST00000557352 GJB1P08034 283 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 ITPKBP27987 946 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 FXR1P51114 621 aaKnown RBP eCLIP5.54□□□□□ -1.52
VRK1-207ENST00000557352 SOX10P56693 466 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 PSMC1P62191 440 aaKnown RBP5.54□□□□□ -1.52
VRK1-207ENST00000557352 GLCCI1Q86VQ1 547 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 GNL3LQ9NVN8 582 aaKnown RBP5.54□□□□□ -1.52
VRK1-207ENST00000557352 ETAA1Q9NY74 926 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 ST3GAL5Q9UNP4 418 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 CADPSQ9ULU8 1353 aa5.54□□□□□ -1.52
VRK1-207ENST00000557352 ADGRA2Q96PE1 1338 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 WASHC2CQ9Y4E1 1318 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 COL3A1P02461 1466 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms