RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 ZNF365Q70YC5 407 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 CCDC197Q8NCU1 140 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 ARHGEF2Q92974 986 aaKnown RBP23.96■■□□□ 1.43
RCCD1-208ENST00000557266 NRBP2Q9NSY0 501 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 RNF181Q9P0P0 153 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 CREB1P16220 341 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 KLRC2P26717 231 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 STAT5BP51692 787 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 ZNF252P-AS1Q0IIN9 211 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 NFX1Q12986 1120 aaKnown RBP23.95■■□□□ 1.42
RCCD1-208ENST00000557266 LACTB2Q53H82 288 aaPredicted RBP23.95■■□□□ 1.42
RCCD1-208ENST00000557266 ZBTB33Q86T24 672 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 PRUNE1Q86TP1 453 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 CCDC89Q8N998 374 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 PRPF31Q8WWY3 499 aaKnown RBP23.95■■□□□ 1.42
RCCD1-208ENST00000557266 IMPG2Q9BZV3 1241 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 MTMR12Q9C0I1 747 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 IP6K2Q9UHH9 426 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 TMEM191CA6NGB0 347 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 PI4K2BG5E9Z4 385 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 MSCO60682 206 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 MAFO75444 373 aaPredicted RBP23.95■■□□□ 1.42
RCCD1-208ENST00000557266 TMEM191BP0C7N4 346 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 EDNRBP24530 442 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 IZUMO3Q5VZ72 239 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 VSTM1Q6UX27 236 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 LBX2Q6XYB7 198 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 WDR49Q8IV35 697 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 SUGP1Q8IWZ8 645 aaKnown RBP23.95■■□□□ 1.42
RCCD1-208ENST00000557266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.95■■□□□ 1.421e-7■■■■■ 38.3
RCCD1-208ENST00000557266 BTBD7Q9P203 1132 aa23.95■■□□□ 1.42
RCCD1-208ENST00000557266 TCRBV5S1A1TA0A578 114 aa23.94■■□□□ 1.42
RCCD1-208ENST00000557266 SOWAHBA6NEL2 793 aa23.94■■□□□ 1.42
RCCD1-208ENST00000557266 TCEA3O75764 348 aa23.94■■□□□ 1.42
RCCD1-208ENST00000557266 MYL6P60660 151 aa23.94■■□□□ 1.42
RCCD1-208ENST00000557266 BBXQ8WY36 941 aaPredicted RBP23.94■■□□□ 1.42
RCCD1-208ENST00000557266 WDR90Q96KV7 1748 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 FOXO6A8MYZ6 492 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 KRT10P13645 584 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 P3H4Q92791 437 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 SLITRK1Q96PX8 696 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 TMEM120BA0PK00 339 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 TOM1L1O75674 476 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 VIMP08670 466 aaKnown RBP23.93■■□□□ 1.42
RCCD1-208ENST00000557266 BRD2P25440 801 aaKnown RBP23.93■■□□□ 1.42
RCCD1-208ENST00000557266 TCF7P36402 384 aaPredicted RBP23.93■■□□□ 1.42
RCCD1-208ENST00000557266 AP3M2P53677 418 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 GRM1Q13255 1194 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 FAM160B1Q5W0V3 765 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 BBOF1Q8ND07 529 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 KDM4CQ9H3R0 1056 aa23.93■■□□□ 1.42
RCCD1-208ENST00000557266 VGLL3A8MV65 326 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 LIASO43766 372 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 SCTRP47872 440 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 LRRC14Q15048 493 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 HIBCHQ6NVY1 386 aaPredicted RBP23.92■■□□□ 1.42
RCCD1-208ENST00000557266 RELL1Q8IUW5 271 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 MCEEQ96PE7 176 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 MRPL4Q9BYD3 311 aaKnown RBP23.92■■□□□ 1.42
RCCD1-208ENST00000557266 CISHQ9NSE2 258 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 IVNS1ABPQ9Y6Y0 642 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 RASSF9O75901 435 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 LSM8O95777 96 aaKnown RBP23.92■■□□□ 1.42
RCCD1-208ENST00000557266 CALB1P05937 261 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 CETPP11597 493 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 ATP5DP30049 168 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 EFNA5P52803 228 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 OGDHQ02218 1023 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 SF3A3Q12874 501 aaKnown RBP eCLIP23.92■■□□□ 1.427e-8■■■■□ 25.9
RCCD1-208ENST00000557266 NEDD9Q14511 834 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 ITIH4Q14624 930 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 ICE2Q659A1 982 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 KAZNQ674X7 775 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 CDCA2Q69YH5 1023 aaPredicted RBP23.92■■□□□ 1.42
RCCD1-208ENST00000557266 MFSD7Q6UXD7 560 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 RCOR2Q8IZ40 523 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 GLIS1Q8NBF1 620 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 MGARPQ8TDB4 240 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 FAM212AQ96EL1 285 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 RBM41Q96IZ5 413 aaKnown RBP23.92■■□□□ 1.42
RCCD1-208ENST00000557266 ACO2Q99798 780 aaKnown RBP23.92■■□□□ 1.42
RCCD1-208ENST00000557266 TCHPQ9BT92 498 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 NIF3L1Q9GZT8 377 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 SNCAIPQ9Y6H5 919 aa23.92■■□□□ 1.42
RCCD1-208ENST00000557266 CCT8L1PA6NM43 557 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 F8VP50 259 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 ABLIM1O14639 778 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 KRT1P04264 644 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 P3H1Q32P28 736 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 ZNF394Q53GI3 561 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 GSTA5Q7RTV2 222 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 RIOX2Q8IUF8 465 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 CYP4X1Q8N118 509 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 ANKS4BQ8N8V4 417 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 SEPT1Q8WYJ6 367 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 ELAC2Q9BQ52 826 aaKnown RBP23.91■■□□□ 1.42
RCCD1-208ENST00000557266 LGALS13Q9UHV8 139 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 DNPEPQ9ULA0 475 aa23.91■■□□□ 1.42
RCCD1-208ENST00000557266 GHRP10912 638 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 HIRAP54198 1017 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms