RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 CHMP5Q9NZZ3 219 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 ANKFY1Q9P2R3 1169 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 KCNG1Q9UIX4 513 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 SMG5Q9UPR3 1016 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 YIPF1Q9Y548 306 aa11.67□□□□□ -0.54
HNRNPC-230ENST00000557201 CEP250Q9BV73 2442 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 CLDN3O15551 220 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 CLTAP09496 248 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 CHRNB1P11230 501 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 CYP3A5P20815 502 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 GDI1P31150 447 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 SMTNP53814 917 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 NCKAP1LP55160 1127 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 SPAG1Q07617 926 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 STRN3Q13033 797 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 GAS6Q14393 721 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 TEAD2Q15562 447 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 WDR44Q5JSH3 913 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 IQCEQ6IPM2 695 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 ZSCAN18Q8TBC5 510 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 LRRC15Q8TF66 581 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 DEPDC1BQ8WUY9 529 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 IER2Q9BTL4 223 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 OXCT2Q9BYC2 517 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 ASAH2Q9NR71 780 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 NCDNQ9UBB6 729 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 TFIP11Q9UBB9 837 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 RCOR1Q9UKL0 485 aa11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 NDRG2Q9UN36 371 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 TIMM13Q9Y5L4 95 aaPredicted RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 SRPRBQ9Y5M8 271 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-230ENST00000557201 F5P12259 2224 aa11.65□□□□□ -0.54
HNRNPC-230ENST00000557201 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 HEPACAM2A8MVW5 462 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 PPP6R2O75170 966 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 PIGRP01833 764 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 OR4Q2P0C623 313 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 PLA2G4BP0C869 781 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 MYL4P12829 197 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 CPB1P15086 417 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 TNFSF9P41273 254 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 KRT85P78386 507 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 CEBPZQ03701 1054 aaKnown RBP11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 YWHAHQ04917 246 aaPredicted RBP11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 FCHO2Q0JRZ9 810 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 GPR17Q13304 367 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 ELMOD1Q8N336 334 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 GPR161Q8N6U8 529 aaKnown RBP11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 FAM3CQ92520 227 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 AK8Q96MA6 479 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 GPR88Q9GZN0 384 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 LMAN1LQ9HAT1 526 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 PARD6AQ9NPB6 346 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 UBQLN1Q9UMX0 589 aaKnown RBP11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 PIAS3Q9Y6X2 628 aa11.65□□□□□ -0.55
HNRNPC-230ENST00000557201 TICRRQ7Z2Z1 1910 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 OR6C75A6NL08 312 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 LACTBL1A8MY62 500 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 PPEF2O14830 753 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 ZNF263O14978 683 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 SPTLC2O15270 562 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 TYMPP19971 482 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 LONP1P36776 959 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 GUCY2FP51841 1108 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 ZNF131P52739 623 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 ATXN1P54253 815 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 DUSP4Q13115 394 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 MYBPC2Q14324 1141 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 ENOX2Q16206 610 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 FOXD4L6Q3SYB3 417 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 CENPPQ6IPU0 288 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 FOXD4L3Q6VB84 417 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 GAREM2Q75VX8 874 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 HAUS6Q7Z4H7 955 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 PGLYRP2Q96PD5 576 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 TSPAN18Q96SJ8 248 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 PLIN2Q99541 437 aa11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 SCAND2PQ9GZW5 306 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 LARSQ9P2J5 1176 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-230ENST00000557201 A0A0B4J269 797 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 A0A1W2PRU2 124 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 MTMR11A4FU01 709 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 H0YCG3 227 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 CHADO15335 359 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 PAPSS2O95340 614 aaPredicted RBP11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 CCNE1P24864 410 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 NRLP54845 237 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 LILRA4P59901 499 aa11.63□□□□□ -0.55
HNRNPC-230ENST00000557201 SATB1Q01826 763 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms