RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 DAGLAQ9Y4D2 1042 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 KCNQ2O43526 872 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ECE2O60344 883 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ZCWPW2Q504Y3 356 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 LACTB2Q53H82 288 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 MROH9Q5TGP6 573 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 RSBN1LQ6PCB5 846 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 GADL1Q6ZQY3 521 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 LARGE2Q8N3Y3 721 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 SPATA20Q8TB22 786 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 RBM46Q8TBY0 533 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 TNFRSF25Q93038 417 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 E2F7Q96AV8 911 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 OXNAD1Q96HP4 312 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 GORASP1Q9BQQ3 440 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 TMEM121Q9BTD3 319 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 RPF1Q9H9Y2 349 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 RBAKQ9NYW8 714 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 TSR3Q9UJK0 312 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 FEM1BQ9UK73 627 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 AURKCQ9UQB9 309 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ZBTB39O15060 712 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 GPC4O75487 556 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 KRT36O76013 467 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 RAG1P15918 1043 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CALB2P22676 271 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ADORA2BP29275 332 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 GTF2H1P32780 548 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 AQP5P55064 265 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 SOX10P56693 466 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 FAXCQ5TGI0 409 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 RNF43Q68DV7 783 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 PPP1R2P3Q6NXS1 205 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DENND5BQ6ZUT9 1274 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 USP13Q92995 863 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 SDCCAG3Q96C92 435 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CYP26B1Q9NR63 512 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CHST7Q9NS84 486 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 PCDHGC5Q9Y5F6 944 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DUOX1Q9NRD9 1551 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CCDC78A2IDD5 438 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 SPDYE5A6NIY4 337 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 TISP43B9A030 160 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ANKRD63C9JTQ0 380 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 KDM1AO60341 852 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 UPP2O95045 317 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ENO3P13929 434 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CYP11B1P15538 503 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CA8P35219 290 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 CDH6P55285 790 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 YWHAHQ04917 246 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 NFX1Q12986 1120 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ITPK1Q13572 414 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 UBAP2LQ14157 1087 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 TFDP1Q14186 410 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 SEZ6Q53EL9 994 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 PDPK2PQ6A1A2 396 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 FAM196AQ6ZSG2 479 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 TRIM67Q6ZTA4 783 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ALYREFQ86V81 257 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 APLFQ8IW19 511 aaPredicted RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 EFCAB3Q8N7B9 438 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 C7orf31Q8N865 590 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 PRPF31Q8WWY3 499 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 KRT35Q92764 455 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 MED15Q96RN5 788 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DRC3Q9H069 523 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DNAJC18Q9H819 358 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 SPC25Q9HBM1 224 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 ZNF302Q9NR11 478 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DDX18Q9NVP1 670 aaKnown RBP5.23□□□□□ -1.57
SYNE2-223ENST00000557005 DTNAQ9Y4J8 743 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 NFAT5O94916 1531 aa5.23□□□□□ -1.57
SYNE2-223ENST00000557005 GOLGA8QA0A0J9YX86 632 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-223ENST00000557005 GOLGA8OA6NCC3 632 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 BTNL10A8MVZ5 291 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 GOLGA8NF8WBI6 632 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 ADCY3O60266 1144 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 SMNDC1O75940 238 aaKnown RBP eCLIP5.22□□□□□ -1.57
SYNE2-223ENST00000557005 ETS2P15036 469 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 PECAM1P16284 738 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-223ENST00000557005 ARL4AP40617 200 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 NME3Q13232 169 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 NBPF20Q3BBV1 942 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 SPDYCQ5MJ68 293 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 CDC42EP5Q6NZY7 148 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 RAB44Q7Z6P3 723 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-223ENST00000557005 IRF2BP1Q8IU81 584 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 RNF135Q8IUD6 432 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 TTC13Q8NBP0 860 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 C1orf131Q8NDD1 294 aaKnown RBP5.22□□□□□ -1.57
SYNE2-223ENST00000557005 B4GALNT2Q8NHY0 566 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 ZNF75CPQ92670 426 aaPredicted RBP5.22□□□□□ -1.57
SYNE2-223ENST00000557005 TMEM143Q96AN5 459 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 RMDN2Q96LZ7 410 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 GPRC5CQ9NQ84 441 aa5.22□□□□□ -1.57
SYNE2-223ENST00000557005 C20orf96Q9NUD7 363 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms