RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 NINLQ9Y2I6 1382 aa6.55□□□□□ -1.36
HIF1A-209ENST00000556827 PRR5-ARHGAP8B1AHC4 643 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 AKAP10O43572 662 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 PPFIA4O75335 1185 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 ABHD16AO95870 558 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 ITGB1P05556 798 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 HSP90B1P14625 803 aaKnown RBP6.54□□□□□ -1.36
HIF1A-209ENST00000556827 KRT4P19013 534 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 EDNRBP24530 442 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 ECHS1P30084 290 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 LY6G5CQ5SRR4 150 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 PRAMEF14Q5SWL7 426 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 KCNV1Q6PIU1 500 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 LRRC55Q6ZSA7 311 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 CMTR2Q8IYT2 770 aaKnown RBP6.54□□□□□ -1.36
HIF1A-209ENST00000556827 CPA6Q8N4T0 437 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 PROKR1Q8TCW9 393 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 STON2Q8WXE9 905 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 SSH1Q8WYL5 1049 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 COA7Q96BR5 231 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 PAWRQ96IZ0 340 aaKnown RBP6.54□□□□□ -1.36
HIF1A-209ENST00000556827 CDC5LQ99459 802 aaKnown RBP6.54□□□□□ -1.36
HIF1A-209ENST00000556827 AGAP2Q99490 1192 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 FZD1Q9UP38 647 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 ALS2Q96Q42 1657 aa6.54□□□□□ -1.36
HIF1A-209ENST00000556827 TRPM3Q9HCF6 1732 aaPredicted RBP6.53□□□□□ -1.36
HIF1A-209ENST00000556827 WDR17Q8IZU2 1322 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 EP400Q96L91 3159 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 THSD7AQ9UPZ6 1657 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 FOXN1O15353 648 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PHF2O75151 1096 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PTPN7P35236 360 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 SREBF1P36956 1147 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 SLC6A9P48067 706 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PER3P56645 1201 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 MGAT2Q10469 447 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 IL10RAQ13651 578 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PTPAQ15257 358 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 UAP1L1Q3KQV9 507 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 C3orf36Q3SXR2 165 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 TIGD2Q4W5G0 525 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 METTL24Q5JXM2 366 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 Q6ZPA2 131 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 DOK3Q7L591 496 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 XYLT1Q86Y38 959 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PQLC1Q8N2U9 271 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 JDP2Q8WYK2 163 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 CEP95Q96GE4 821 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PUS7Q96PZ0 661 aaKnown RBP6.53□□□□□ -1.36
HIF1A-209ENST00000556827 UHRF1Q96T88 793 aaPredicted RBP6.53□□□□□ -1.36
HIF1A-209ENST00000556827 MLST8Q9BVC4 326 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 LSM14BQ9BX40 385 aaKnown RBP6.53□□□□□ -1.36
HIF1A-209ENST00000556827 RTFDC1Q9BY42 306 aaPredicted RBP6.53□□□□□ -1.36
HIF1A-209ENST00000556827 KCNH6Q9H252 994 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 PCDHA13Q9Y5I0 950 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 RGPD8O14715 1765 aaPredicted RBP6.53□□□□□ -1.36
HIF1A-209ENST00000556827 SRCAPQ6ZRS2 3230 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 NRAPQ86VF7 1730 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 ABCA3Q99758 1704 aa6.53□□□□□ -1.36
HIF1A-209ENST00000556827 TTC21AQ8NDW8 1320 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 CAMTA1Q9Y6Y1 1673 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 CCDC154A6NI56 674 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 HTRA2O43464 458 aaPredicted RBP6.52□□□□□ -1.37
HIF1A-209ENST00000556827 PPFIA2O75334 1257 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 ABLIM3O94929 683 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 IL33O95760 270 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 PF4V1P10720 104 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 NR4A1P22736 598 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 APOBEC3AP31941 199 aaPredicted RBP6.52□□□□□ -1.37
HIF1A-209ENST00000556827 APBA1Q02410 837 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 PIN1Q13526 163 aaPredicted RBP6.52□□□□□ -1.37
HIF1A-209ENST00000556827 LRRC41Q15345 812 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 ANKS6Q68DC2 871 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 FAM180AQ6UWF9 173 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 RHOUQ7L0Q8 258 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 TRMT2AQ8IZ69 625 aaKnown RBP6.52□□□□□ -1.37
HIF1A-209ENST00000556827 OR7D4Q8NG98 312 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.52□□□□□ -1.37
HIF1A-209ENST00000556827 CCHCR1Q8TD31 782 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 NDC1Q9BTX1 674 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 RHOBTB2Q9BYZ6 727 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 KLHL42Q9P2K6 505 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 CLCA2Q9UQC9 943 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 IPPQ9Y573 584 aa6.52□□□□□ -1.37
HIF1A-209ENST00000556827 COL5A2P05997 1499 aaPredicted RBP6.52□□□□□ -1.37
HIF1A-209ENST00000556827 USP6P35125 1406 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 ZSCAN20P17040 1043 aaPredicted RBP6.51□□□□□ -1.37
HIF1A-209ENST00000556827 LAG3P18627 525 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 CRHR1P34998 444 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 FXR1P51114 621 aaKnown RBP eCLIP6.51□□□□□ -1.37
HIF1A-209ENST00000556827 SLC16A1P53985 500 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 EPHB1P54762 984 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 TXNRD1Q16881 649 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 MFSD14BQ5SR56 506 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 TMEM240Q5SV17 173 aa6.51□□□□□ -1.37
HIF1A-209ENST00000556827 PCSK4Q6UW60 755 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms