RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	TTC8	Q8TAM2	541 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	LRRC3B	Q96PB8	259 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	TIPIN	Q9BVW5	301 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	DNAJC25	Q9H1X3	360 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	ATXN3L	Q9H3M9	355 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	GTSE1	Q9NYZ3	720 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	ANKFY1	Q9P2R3	1169 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	SLC27A5	Q9Y2P5	690 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	ZFHX4	Q86UP3	3567 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	SPTBN2	O15020	2390 aa		13.79	□□□□□ -0.2
SHMT2-223	ENST00000556689	EPG5	Q9HCE0	2579 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	VNN2	O95498	520 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	SMTN	P53814	917 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	SPAG1	Q07617	926 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	MAPK7	Q13164	816 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	GNL2	Q13823	731 aa	Known RBP	13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	PON2	Q15165	354 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	AASDH	Q4L235	1098 aa	Predicted RBP	13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	STXBP5	Q5T5C0	1151 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	CENPP	Q6IPU0	288 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	DSTYK	Q6XUX3	929 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	IGSF22	Q8N9C0	903 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	C12orf50	Q8NA57	414 aa	Predicted RBP	13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	SPIRE2	Q8WWL2	714 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	KIF12	Q96FN5	646 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	ZFYVE19	Q96K21	471 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	RUSC1	Q9BVN2	902 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	CRISPLD1	Q9H336	500 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	C2orf42	Q9NWW7	574 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	OBP2A	Q9NY56	170 aa		13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	NOL7	Q9UMY1	257 aa	Known RBP	13.78	□□□□□ -0.2
SHMT2-223	ENST00000556689	ACACB	O00763	2458 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	CLTA	P09496	248 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	CXCL8	P10145	99 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	CYP3A5	P20815	502 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	MATR3	P43243	847 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	AARS	P49588	968 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	LIMK1	P53667	647 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	PLCB2	Q00722	1185 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	MCL1	Q07820	350 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	CCIN	Q13939	588 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	MYBPC2	Q14324	1141 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	PTPA	Q15257	358 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ZBTB6	Q15916	424 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ARHGAP15	Q53QZ3	475 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	GPR158	Q5T848	1215 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ARMCX5	Q6P1M9	558 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ZPBP2	Q6X784	338 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	GAREM2	Q75VX8	874 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ITIH5	Q86UX2	942 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ATAD1	Q8NBU5	361 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	TMEM161B	Q8NDZ6	487 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	FBXO18	Q8NFZ0	1043 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	PSMG2	Q969U7	264 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	LOXL4	Q96JB6	756 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	MKNK1	Q9BUB5	465 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ARRDC1-AS1	Q9H2J1	176 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	THG1L	Q9NWX6	298 aa	Known RBP	13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	ANGPTL2	Q9UKU9	493 aa		13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	UBQLN1	Q9UMX0	589 aa	Known RBP	13.77	□□□□□ -0.21
SHMT2-223	ENST00000556689	TRIP11	Q15643	1979 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TTC26	A0AVF1	554 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TM4SF5	O14894	197 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	XPOT	O43592	962 aa	Known RBP	13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	ZNF806	P0C7X5	589 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	PLS3	P13797	630 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TYMP	P19971	482 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	GUCY2C	P25092	1073 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	GABRR2	P28476	465 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	WEE1	P30291	646 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	HOXC13	P31276	330 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TUFM	P49411	452 aa	Known RBP	13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TNK2	Q07912	1038 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	ST3GAL1	Q11201	340 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	NBR1	Q14596	966 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	SF3A2	Q15428	464 aa	Known RBP	13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	OVOS1	Q6IE37	1185 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	CACNA2D4	Q7Z3S7	1137 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TMEM130	Q8N3G9	435 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	BPIFB1	Q8TDL5	484 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	GAB3	Q8WWW8	586 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TASP1	Q9H6P5	420 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	HSFX1	Q9UBD0	423 aa		13.76	□□□□□ -0.21
SHMT2-223	ENST00000556689	TICRR	Q7Z2Z1	1910 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	CCDC163	A0A0D9SF12	145 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	MTMR11	A4FU01	709 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	PP2D1	A8MPX8	630 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	LACTBL1	A8MY62	500 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	EXTL3	O43909	919 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	ATG13	O75143	517 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	SOAT2	O75908	522 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	MAPT	P10636	758 aa	Known RBP	13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	CDC25A	P30304	524 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	CACNB1	Q02641	598 aa	Predicted RBP	13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	RAD51AP2	Q09MP3	1159 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	CCDC6	Q16204	474 aa		13.75	□□□□□ -0.21
SHMT2-223	ENST00000556689	KYAT1	Q16773	422 aa		13.75	□□□□□ -0.21

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