RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 C7orf61Q8IZ16 206 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 DDHD1Q8NEL9 900 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 OR6P1Q8NGX9 317 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 GPBAR1Q8TDU6 330 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 GATAD2BQ8WXI9 593 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 GAL3ST3Q96A11 431 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TMA16Q96EY4 203 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 WDR89Q96FK6 387 aaPredicted RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 EAF1Q96JC9 268 aaPredicted RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 ZC3H10Q96K80 434 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 SELENOSQ9BQE4 189 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 NT5C1AQ9BXI3 368 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 OSBPL1AQ9BXW6 950 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 MTMR12Q9C0I1 747 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 NT5C3AQ9H0P0 336 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 CDH19Q9H159 772 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 CAAP1Q9H8G2 361 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 KIAA1586Q9HCI6 787 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 NLRC4Q9NPP4 1024 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 TAS2R7Q9NYW3 318 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 SAMD15Q9P1V8 674 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 SLC7A8Q9UHI5 535 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 CNOT6Q9ULM6 557 aaKnown RBP6.57□□□□□ -1.36
TDP1-215ENST00000556498 SETD5Q9C0A6 1442 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
TDP1-215ENST00000556498 MROH5Q6ZUA9 1318 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 LOC100653049A0A140TA62 436 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 MEGF11A6BM72 1044 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CCDC69A6NI79 296 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 H0Y626 953 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 L7N2F9 121 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 UBXN8O00124 270 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 MYO1FO00160 1098 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 PEX1O43933 1283 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 ZNF862O60290 1169 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CRTAPO75718 401 aaPredicted RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 KRT34O76011 436 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 WISP1O95388 367 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CNOT4O95628 575 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 F13A1P00488 732 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 KRT7P08729 469 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 SPATA31C1P0DKV0 1188 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CSF2RAP15509 400 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 POLR2CP19387 275 aaPredicted RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 CCND1P24385 295 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 COL8A1P27658 744 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 LONP1P36776 959 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 MAN2A2P49641 1150 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 PPP2R2AP63151 447 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CDK18Q07002 472 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TUBB2AQ13885 445 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 GRIK4Q16099 956 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CCNG2Q16589 344 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 ERCC6LQ2NKX8 1250 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 C5orf22Q49AR2 442 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 CDONQ4KMG0 1287 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 FBXO48Q5FWF7 155 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 HECTD3Q5T447 861 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 DENND2CQ68D51 928 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 IQSEC1Q6DN90 963 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 FAM171BQ6P995 826 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 SLC30A10Q6XR72 485 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 SLC9B2Q86UD5 537 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 P3H2Q8IVL5 708 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 FUKQ8N0W3 1084 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TMEM130Q8N3G9 435 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 DNAAF3Q8N9W5 541 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 OR8K3Q8NH51 312 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 BCAS4Q8TDM0 211 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 ATXN2LQ8WWM7 1075 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 RUFY2Q8WXA3 655 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 STARD8Q92502 1023 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 SHC3Q92529 594 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TSNARE1Q96NA8 513 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TTC25Q96NG3 672 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 DHRS9Q9BPW9 319 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 ZPBPQ9BS86 351 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TUBB2BQ9BVA1 445 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TEX13BQ9BXU2 312 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 MRPL1Q9BYD6 325 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 MRPL18Q9H0U6 180 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 DENND2DQ9H6A0 471 aaPredicted RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 NCOA5Q9HCD5 579 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 TRPC7Q9HCX4 862 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 RHBDL2Q9NX52 303 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 EHD3Q9NZN3 535 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 TRPM5Q9NZQ8 1165 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 DBF4Q9UBU7 674 aaPredicted RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 CHTOPQ9Y3Y2 248 aaKnown RBP6.56□□□□□ -1.36
TDP1-215ENST00000556498 NFE2L3Q9Y4A8 694 aa6.56□□□□□ -1.36
TDP1-215ENST00000556498 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 AQRO60306 1485 aaKnown RBP eCLIP6.55□□□□□ -1.36
TDP1-215ENST00000556498 TARBP1Q13395 1621 aaKnown RBP6.55□□□□□ -1.36
TDP1-215ENST00000556498 A0A1B0GVG6 124 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 SYCE3A1L190 88 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 TMEM114B3SHH9 223 aa6.55□□□□□ -1.36
TDP1-215ENST00000556498 B8ZZF3 427 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms