RNA–Protein interactions for RNA: ENST00000556431.1

SIVA1-208, Transcript of SIVA1 apoptosis inducing factor, human

TSL 2

Gene SIVA1, Length 4,142 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIVA1-208	ENST00000556431	SUPT20HL2	P0C7V6	817 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	PYGB	P11216	843 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	GCLC	P48506	637 aa	Predicted RBP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	CLK2	P49760	499 aa	Known RBP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	PSMC1	P62191	440 aa	Known RBP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	TNFAIP2	Q03169	654 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	DGKZ	Q13574	1117 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	MXD4	Q14582	209 aa	Predicted RBP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	CBWD6	Q4V339	395 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	CBWD3	Q5JTY5	395 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	CBWD5	Q5RIA9	395 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	NIPA1	Q7RTP0	329 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	PURB	Q96QR8	312 aa	Known RBP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	MAD1L1	Q9Y6D9	718 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	ASTN1	O14525	1302 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	EXOC1L	A0A1B0GW35	172 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	ASB14	A6NK59	587 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	PI4K2B	G5E9Z4	385 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	DDX3X	O00571	662 aa	Known RBP eCLIP	12.09	□□□□□ -0.47	7e-8	■■■■■ 45.3
SIVA1-208	ENST00000556431	DSG3	P32926	999 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	KCNJ1	P48048	391 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	AP3M2	P53677	418 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	LONRF1	Q17RB8	773 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	BBS9	Q3SYG4	887 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	DARS2	Q6PI48	645 aa	Known RBP	12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	GALNT15	Q8N3T1	639 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	DOT1L	Q8TEK3	1739 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	LRRC37B	Q96QE4	947 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	TMEM117	Q9H0C3	514 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	IP6K2	Q9UHH9	426 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	NUB1	Q9Y5A7	615 aa		12.09	□□□□□ -0.47
SIVA1-208	ENST00000556431	PJA2	O43164	708 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	TCF7	P36402	384 aa	Predicted RBP	12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SV2A	Q7L0J3	742 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SNRNP27	Q8WVK2	155 aa	Known RBP	12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SPON1	Q9HCB6	807 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	PARVA	Q9NVD7	372 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	KLHL11	Q9NVR0	708 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	VAV3	Q9UKW4	847 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	STRIP2	Q9ULQ0	834 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	TMEM120B	A0PK00	339 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SNX3	O60493	162 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	C2CD6	Q53TS8	623 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	C6orf163	Q5TEZ5	329 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	ZNF662	Q6ZS27	426 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	BTBD6	Q96KE9	485 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	IKZF4	Q9H2S9	585 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SMARCAD1	Q9H4L7	1026 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	GTF3C4	Q9UKN8	822 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	C5orf60	A6NFR6	353 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	TBC1D12	O60347	775 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	PHF2	O75151	1096 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	BRAF	P15056	766 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	KRT17	Q04695	432 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	OLFML2B	Q68BL8	750 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	JAML	Q86YT9	394 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	NME8	Q8N427	588 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	OPTN	Q96CV9	577 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	CFAP57	Q96MR6	1250 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SMC6	Q96SB8	1091 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	CYTH2	Q99418	400 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	SAYSD1	Q9NPB0	183 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	USP20	Q9Y2K6	914 aa		12.08	□□□□□ -0.48
SIVA1-208	ENST00000556431	KLRG2	A4D1S0	409 aa	Predicted RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431		M0QYV0	167 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	ONECUT3	O60422	494 aa	Predicted RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	RARA	P10276	462 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	CALB2	P22676	271 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	HNRNPH3	P31942	346 aa	Known RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	ABL2	P42684	1182 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	CHADL	Q6NUI6	762 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SRRM1	Q8IYB3	904 aa	Known RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	ANKRD13A	Q8IZ07	590 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	FBXO41	Q8TF61	875 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	DHX38	Q92620	1227 aa	Known RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	ELMO3	Q96BJ8	720 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SLC12A4	Q9UP95	1085 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	NUP98	P52948	1817 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	MAP3K7	O43318	606 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SLC25A27	O95847	323 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	CYP11B1	P15538	503 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	CACNA2D1	P54289	1103 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	CDR2	Q01850	454 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	IFRD2	Q12894	506 aa	Predicted RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	NFX1	Q12986	1120 aa	Known RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	DDX50	Q9BQ39	737 aa	Known RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	GAN	Q9H2C0	597 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SEPT10	Q9P0V9	454 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	LIN7A	O14910	233 aa	Predicted RBP	12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	PGK2	P07205	417 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	GART	P22102	1010 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SLC1A1	P43005	524 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	IER5	Q5VY09	327 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SLC47A2	Q86VL8	602 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	DTNBP1	Q96EV8	351 aa		12.07	□□□□□ -0.48
SIVA1-208	ENST00000556431	SYT15	Q9BQS2	421 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms