RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 HAUS6Q7Z4H7 955 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 TMEM161BQ8NDZ6 487 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 ITFG1Q8TB96 612 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 ING5Q8WYH8 240 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 FGF13Q92913 245 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 NXPE3Q969Y0 559 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 AK8Q96MA6 479 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 REEP2Q9BRK0 252 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 NTPCRQ9BSD7 190 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 RPP25Q9BUL9 199 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 TBC1D17Q9HA65 648 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 TOR4AQ9NXH8 423 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 KCND2Q9NZV8 630 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 CNTN3Q9P232 1028 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 LARSQ9P2J5 1176 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 DNMT3BQ9UBC3 853 aaKnown RBP7.3□□□□□ -1.24
PSEN1-216ENST00000556066 WNT16Q9UBV4 365 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 KCNG1Q9UIX4 513 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 CDH7Q9ULB5 785 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 BACE2Q9Y5Z0 518 aa7.3□□□□□ -1.24
PSEN1-216ENST00000556066 DNAH14Q0VDD8 3507 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 CEP295Q9C0D2 2601 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 PRR23AA6NEV1 266 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ANHXE9PGG2 379 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 H0YCG3 227 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 H7C4K7 107 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 K7ENM7 598 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ABLIM1O14639 778 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 HNRNPDLO14979 420 aaKnown RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 SYN3O14994 580 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MEFVO15553 781 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 PAPLNO95428 1278 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 LRG1P02750 347 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 CLTAP09496 248 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 CXCL8P10145 99 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 PLCG1P19174 1290 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MARCKSP29966 332 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 HOXA9P31269 272 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 RPL9P32969 192 aaKnown RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 LIG4P49917 911 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 GPC5P78333 572 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ROR1Q01973 937 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 GRIN1Q05586 938 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MCL1Q07820 350 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 KCNH2Q12809 1159 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 KARSQ15046 597 aaKnown RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 SF3A1Q15459 793 aaKnown RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 CTXN3Q4LDR2 81 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ARSHQ5FYA8 562 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ZPBP2Q6X784 338 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MTSS1LQ765P7 747 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 BRAPQ7Z569 592 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 FRMD5Q7Z6J6 570 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 CCDC105Q8IYK2 499 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 TMEM130Q8N3G9 435 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MYCT1Q8N699 235 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 DTWD2Q8NBA8 298 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ZNF461Q8TAF7 563 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 FGF14Q92915 247 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 TBC1D32Q96NH3 1257 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 KXD1Q9BQD3 176 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 CYP4F11Q9HBI6 524 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ARHGEF3Q9NR81 526 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 TUBGCP4Q9UGJ1 667 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 DACH1Q9UI36 760 aa7.29□□□□□ -1.24
PSEN1-216ENST00000556066 MRPS23Q9Y3D9 190 aaKnown RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ZFP37Q9Y6Q3 630 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 ANKRD11Q6UB99 2663 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-216ENST00000556066 SCN1AP35498 2009 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ATRXP46100 2492 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 WDR27A2RRH5 827 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 TBCAO75347 108 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 BMP15O95972 392 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 DCNP07585 359 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 RHOP08100 348 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 CPB1P15086 417 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 LONP1P36776 959 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 NBL1P41271 181 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 TNFSF9P41273 254 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ABL2P42684 1182 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 GUCY2FP51841 1108 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 NCKAP1LP55160 1127 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 CEBPZQ03701 1054 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 PPP2R3AQ06190 1150 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ADCY1Q08828 1119 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 SNW1Q13573 536 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ANGPT1Q15389 498 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 SLC8B1Q6J4K2 584 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ZNF280DQ6N043 979 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 USP37Q86T82 979 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 NPAS3Q8IXF0 933 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 APPL2Q8NEU8 664 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 LRRC15Q8TF66 581 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 RAD54LQ92698 747 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 MCRS1Q96EZ8 462 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms