RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 RASSF8Q8NHQ8 419 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 SPATA18Q8TC71 538 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 PSMG2Q969U7 264 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 LRRC3Q9BY71 257 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 PLA2G2FQ9BZM2 168 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 ZSCAN16Q9H4T2 348 aaPredicted RBP8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 BRD9Q9H8M2 597 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 ZNF334Q9HCZ1 680 aaPredicted RBP8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 OLFML3Q9NRN5 406 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 TUBGCP4Q9UGJ1 667 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 AGO2Q9UKV8 859 aaKnown RBP8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 EXOC7Q9UPT5 735 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 PCDHB13Q9Y5F0 798 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 PCDHGA2Q9Y5H1 932 aa8.44□□□□□ -1.06
PTCSC3-201ENST00000556013 CFAP54Q96N23 3096 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 EP300Q09472 2414 aaPredicted RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 KIAA0391O15091 583 aaKnown RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 CHADO15335 359 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 KINO60870 393 aaKnown RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 IL18RAPO95256 599 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 CEBPBP17676 345 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 TXLNAP40222 546 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 PNPLA4P41247 253 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 CCR2P41597 374 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 TAF6P49848 677 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 NRLP54845 237 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 CACNB1Q02641 598 aaPredicted RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 FCHO2Q0JRZ9 810 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 DUSP4Q13115 394 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 DHX8Q14562 1220 aaKnown RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 PPP2R5DQ14738 602 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 TMEM132DQ14C87 1099 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 UBXN2BQ14CS0 331 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 SPECC1Q5M775 1068 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 RRAGBQ5VZM2 374 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 JADE1Q6IE81 842 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 SLC39A4Q6P5W5 647 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 CCDC73Q6ZRK6 1079 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 DNAJB7Q7Z6W7 309 aaPredicted RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 METTL23Q86XA0 190 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 ZNF687Q8N1G0 1237 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 THEM5Q8N1Q8 247 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 SPPL2BQ8TCT7 592 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 KCNG4Q8TDN1 519 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 LRRC15Q8TF66 581 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 CACTINQ8WUQ7 758 aaKnown RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 ING5Q8WYH8 240 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 RUBCNQ92622 972 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 TCEAL4Q96EI5 215 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 KXD1Q9BQD3 176 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 LRRC27Q9C0I9 530 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 C8orf33Q9H7E9 229 aaPredicted RBP8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 ZSCAN32Q9NX65 697 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 YIPF1Q9Y548 306 aa8.43□□□□□ -1.06
PTCSC3-201ENST00000556013 MYH11P35749 1972 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 FRMD3A2A2Y4 597 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 MTMR11A4FU01 709 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SHISA7A6NL88 538 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ANKRD63C9JTQ0 380 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ZNF263O14978 683 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 LILRB5O75023 590 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 VNN2O95498 520 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SDHBP21912 280 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 GARTP22102 1010 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 TARSP26639 723 aaKnown RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 GRIN1Q05586 938 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SPAG1Q07617 926 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SLC39A14Q15043 492 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 NFE2Q16621 373 aaPredicted RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ARHGAP29Q52LW3 1261 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 CRELD2Q6UXH1 353 aaPredicted RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 VITQ6UXI7 678 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 TPRG1Q6ZUI0 275 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 DPH6Q7L8W6 267 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 TMC8Q8IU68 726 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 DCP1BQ8IZD4 617 aaKnown RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 HS6ST3Q8IZP7 471 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SYNPOQ8N3V7 929 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SUMF1Q8NBK3 374 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ZSCAN18Q8TBC5 510 aaPredicted RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ATRIPQ8WXE1 791 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 FAM3CQ92520 227 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 DNAJC19Q96DA6 116 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 EPSTI1Q96J88 318 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ZSWIM3Q96MP5 696 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ACCSQ96QU6 501 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ZCWPW1Q9H0M4 648 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 DNAJC25Q9H1X3 360 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 CHRDQ9H2X0 955 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 ZHX3Q9H4I2 956 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 TMEM206Q9H813 350 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 HEBP1Q9NRV9 189 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 SPATA6Q9NWH7 488 aaPredicted RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 DPP3Q9NY33 737 aa8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 FBXO2Q9UK22 296 aaPredicted RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 MTF2Q9Y483 593 aaPredicted RBP8.42□□□□□ -1.06
PTCSC3-201ENST00000556013 TIMM13Q9Y5L4 95 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms