RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
TMEM260-208ENST00000555905 ARHGEF37A1IGU5 675 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 CARNS1A5YM72 827 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 FOXN3O00409 490 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 HUS1O60921 280 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 ALDH2P05091 517 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 FERP16591 822 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 USP8P40818 1118 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 MAGEA10P43363 369 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 BTG3Q14201 252 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 SPOUT1Q5T280 376 aaKnown RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 TMCO2Q7Z6W1 182 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 CMTR2Q8IYT2 770 aaKnown RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 CCDC112Q8NEF3 446 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 APPL2Q8NEU8 664 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 SHC3Q92529 594 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 KAT5Q92993 513 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 ZNF689Q96CS4 500 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 ARID3AQ99856 593 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 PAAF1Q9BRP4 392 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 COLEC11Q9BWP8 271 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 BCO2Q9BYV7 579 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 DNAI2Q9GZS0 605 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 CXXC1Q9P0U4 656 aaPredicted RBP11.81□□□□□ -0.52
TMEM260-208ENST00000555905 DNAJB4Q9UDY4 337 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 PCDHB4Q9Y5E5 795 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 PTPRSQ13332 1948 aa11.81□□□□□ -0.52
TMEM260-208ENST00000555905 TMEM189-UBE2V1I3L0A0 370 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 CYB561D2O14569 222 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 SPTLC1O15269 473 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 B4GALT3O60512 393 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 TADA2AO75478 443 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 GFPT2O94808 682 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 KIF4AO95239 1232 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 GJB5O95377 273 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 WEE2P0C1S8 567 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 ODC1P11926 461 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 CD58P19256 250 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 HNRNPH3P31942 346 aaKnown RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 ALDH7A1P49419 539 aaKnown RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 BPIFB4P59827 614 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 ARID5AQ03989 594 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 DSTYKQ6XUX3 929 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 DPH6Q7L8W6 267 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 LRRC8AQ8IWT6 810 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 FAM71AQ8IYT1 594 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 TOP6BLQ8N6T0 577 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 C3orf58Q8NDZ4 430 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 TRIM44Q96DX7 344 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 SENP8Q96LD8 212 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 GPR88Q9GZN0 384 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 SMYD3Q9H7B4 428 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 CISHQ9NSE2 258 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 PRG3Q9Y2Y8 225 aaPredicted RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 INSL6Q9Y581 213 aa11.8□□□□□ -0.52
TMEM260-208ENST00000555905 BZW2Q9Y6E2 419 aaKnown RBP11.8□□□□□ -0.52
TMEM260-208ENST00000555905 NRP1O14786 923 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 CYP26A1O43174 497 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 TACC1O75410 805 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 SERPING1P05155 500 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 GALTP07902 379 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 FAM163BP0C2L3 166 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 PNMA6AP0CW24 399 aaPredicted RBP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 LAG3P18627 525 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 SLC11A1P49279 550 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 AARSP49588 968 aaKnown RBP eCLIP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 CDH8P55286 799 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 BCAR1P56945 870 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 HTRA4P83105 476 aaPredicted RBP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 KLHL30Q0D2K2 578 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 MEA1Q16626 185 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 TMEM270Q6UE05 265 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 CYP26C1Q6V0L0 522 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 TMEM86AQ8N2M4 240 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 HASPINQ8TF76 798 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 RNPC3Q96LT9 517 aaKnown RBP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 SNX25Q9H3E2 840 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 CWH43Q9H720 699 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 RC3H2Q9HBD1 1191 aaKnown RBP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 DSEQ9UL01 958 aa11.79□□□□□ -0.52
TMEM260-208ENST00000555905 BARX2Q9UMQ3 279 aaPredicted RBP11.79□□□□□ -0.52
TMEM260-208ENST00000555905 COL4A6Q14031 1691 aa11.78□□□□□ -0.52
TMEM260-208ENST00000555905 STK25O00506 426 aa11.78□□□□□ -0.52
TMEM260-208ENST00000555905 TLL1O43897 1013 aa11.78□□□□□ -0.52
TMEM260-208ENST00000555905 CDK17Q00537 523 aa11.78□□□□□ -0.52
TMEM260-208ENST00000555905 PTK2Q05397 1052 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms