RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ANKRD42Q8N9B4 389 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CCDC63Q8NA47 563 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 EXD1Q8NHP7 514 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ZBED3Q96IU2 234 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 RBM41Q96IZ5 413 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 JPH2Q9BR39 696 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 C11orf70Q9BRQ4 267 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 HEMGNQ9BXL5 484 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 OSBPL8Q9BZF1 889 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 TRIM7Q9C029 511 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 AS3MTQ9HBK9 375 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 AAASQ9NRG9 546 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 PARVAQ9NVD7 372 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 RBAKQ9NYW8 714 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 IP6K2Q9UHH9 426 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 PGAP2Q9UHJ9 254 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 PNMA3Q9UL41 463 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SLC12A4Q9UP95 1085 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CD2APQ9Y5K6 639 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 PARP14Q460N5 1801 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 DOCK1Q14185 1865 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 COL11A1P12107 1806 aaPredicted RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 O00370 1275 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 SNX3O60493 162 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 CALCAP01258 141 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 CALB1P05937 261 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 BRAFP15056 766 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 KCNA2P16389 499 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 IVDP26440 423 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 GJC1P36383 396 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 MAP2K2P36507 400 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 OAZ1P54368 228 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 ACTR2P61160 394 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 CXCL9Q07325 125 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 NR1H3Q13133 447 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 R3HDM1Q15032 1099 aaKnown RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 LRRC14Q15048 493 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 SPRED3Q2MJR0 410 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 MTERF2Q49AM1 385 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 TDRD10Q5VZ19 366 aaKnown RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 NUGGCQ68CJ6 796 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 LMBRD2Q68DH5 695 aaPredicted RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 TMEM270Q6UE05 265 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 PHLDB2Q86SQ0 1253 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 PHF13Q86YI8 300 aaPredicted RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 PASD1Q8IV76 773 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 ABRAQ8N0Z2 381 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 ANKRD35Q8N283 1001 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 RIBC1Q8N443 379 aaPredicted RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 DEPTORQ8TB45 409 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 MAGEC3Q8TD91 643 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 ATG4CQ96DT6 458 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 CFAP57Q96MR6 1250 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 TTC25Q96NG3 672 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 MSTO1Q9BUK6 570 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 CD248Q9HCU0 757 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 FGFR1OP2Q9NVK5 253 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 DNAJC17Q9NVM6 304 aaKnown RBP7.42□□□□□ -1.22
TDP1-213ENST00000555880 NINJ2Q9NZG7 142 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 LGALS13Q9UHV8 139 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 ACTL7BQ9Y614 415 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 COL4A5P29400 1685 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 PHIPQ8WWQ0 1821 aa7.42□□□□□ -1.22
TDP1-213ENST00000555880 UMODL1Q5DID0 1318 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 LRRIQ4A6NIV6 560 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 K7ERI5 159 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 TP73O15350 636 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 TLR3O15455 904 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 TJP3O95049 919 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ABHD2P08910 425 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 CLTAP09496 248 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 CD58P19256 250 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 RPS12P25398 132 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 MLLT3P42568 568 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 NAMPTP43490 491 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ACOT2P49753 483 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 NLRP11P59045 1033 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 NOMO3P69849 1222 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 KLF1Q13351 362 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 MAMLD1Q13495 774 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 DGKZQ13574 1117 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 P3H1Q32P28 736 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 FAM133BQ5BKY9 247 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 DCAF15Q66K64 600 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 PLEKHA7Q6IQ23 1121 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 HIBCHQ6NVY1 386 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 SPATA21Q7Z572 469 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 RPAINQ86UA6 219 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 CEP57Q86XR8 500 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 RELL1Q8IUW5 271 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 CCDC60Q8IWA6 550 aaPredicted RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 SRRM1Q8IYB3 904 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 RCOR2Q8IZ40 523 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ZCCHC9Q8N567 271 aaKnown RBP7.41□□□□□ -1.22
TDP1-213ENST00000555880 CKAP2Q8WWK9 683 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 SLC7A3Q8WY07 619 aa7.41□□□□□ -1.22
TDP1-213ENST00000555880 ZNF516Q92618 1163 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms