RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PSMD2Q13200 908 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 SNRNP35Q16560 246 aaKnown RBP22.13■■□□□ 1.13
VTI1B-205ENST00000555543 RTL10Q7L3V2 364 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 RDH13Q8NBN7 331 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 OR10T2Q8NGX3 314 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 ZNF560Q96MR9 790 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 KIAA1586Q9HCI6 787 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 INTS13Q9NVM9 706 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 DNMT3BQ9UBC3 853 aaKnown RBP22.13■■□□□ 1.13
VTI1B-205ENST00000555543 RAPGEFL1Q9UHV5 662 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 AGAP1Q9UPQ3 857 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 SORCS3Q9UPU3 1222 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 INSL5Q9Y5Q6 135 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 MYO10Q9HD67 2058 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 NOTCH4Q99466 2003 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 OR6C75A6NL08 312 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 PRR33A8MZF0 331 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 KPNA7A9QM74 516 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 TMEM191BP0C7N4 346 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 SNRPFP62306 86 aaKnown RBP22.12■■□□□ 1.13
VTI1B-205ENST00000555543 SV2CQ496J9 727 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 TRIM67Q6ZTA4 783 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 C12orf56Q8IXR9 622 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 XXYLT1Q8NBI6 393 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 CACTINQ8WUQ7 758 aaKnown RBP22.12■■□□□ 1.13
VTI1B-205ENST00000555543 PGLYRP2Q96PD5 576 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 RTP3Q9BQQ7 232 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
VTI1B-205ENST00000555543 KCTD10Q9H3F6 313 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 EPS15L1Q9UBC2 864 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 ITGA11Q9UKX5 1188 aa22.12■■□□□ 1.13
VTI1B-205ENST00000555543 FSHRP23945 695 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 CYP24A1Q07973 514 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 MTMR3Q13615 1198 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 WSCD1Q658N2 575 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 HFE2Q6ZVN8 426 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 FMR1NBQ8N0W7 255 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-205ENST00000555543 CSGALNACT2Q8N6G5 542 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 OXCT2Q9BYC2 517 aaPredicted RBP22.11■■□□□ 1.13
VTI1B-205ENST00000555543 CRISPLD1Q9H336 500 aa22.11■■□□□ 1.13
VTI1B-205ENST00000555543 CGNQ9P2M7 1197 aaKnown RBP22.11■■□□□ 1.13
VTI1B-205ENST00000555543 RHOBTB3O94955 611 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 LRG1P02750 347 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 KRT19P08727 400 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 COL9A1P20849 921 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 PNPLA4P41247 253 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 SIGLEC14Q08ET2 396 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 GPR17Q13304 367 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 MYBPC2Q14324 1141 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 PABPC1LQ4VXU2 614 aaKnown RBP22.1■■□□□ 1.13
VTI1B-205ENST00000555543 WDR49Q8IV35 697 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 LRRC52Q8N7C0 313 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 ITFG1Q8TB96 612 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 RSAD2Q8WXG1 361 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 ASIC4Q96FT7 647 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 ANKRD36BP1Q96IX9 119 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 KCNK12Q9HB15 430 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.1■■□□□ 1.13
VTI1B-205ENST00000555543 DSEQ9UL01 958 aa22.1■■□□□ 1.13
VTI1B-205ENST00000555543 TMEM221A6NGB7 291 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 M0R296 226 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 DLATP10515 647 aaKnown RBP22.09■■□□□ 1.13
VTI1B-205ENST00000555543 CDR1P51861 262 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 BFSP1Q12934 665 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 PSMD6Q15008 389 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 SURF1Q15526 300 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 SLC5A9Q2M3M2 681 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 TTC9BQ8N6N2 239 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 ENGASEQ8NFI3 743 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 ST13P5Q8NFI4 369 aaPredicted RBP22.09■■□□□ 1.13
VTI1B-205ENST00000555543 PLEKHO2Q8TD55 490 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 CGRRF1Q99675 332 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 L1RE1Q9UN81 338 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 YIPF1Q9Y548 306 aa22.09■■□□□ 1.13
VTI1B-205ENST00000555543 MTMR11A4FU01 709 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 EXOC3O60645 756 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 RHOP08100 348 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 LAMP2P13473 410 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 RBP5P82980 135 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 TWF1Q12792 350 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 SNW1Q13573 536 aaKnown RBP22.08■■□□□ 1.13
VTI1B-205ENST00000555543 DUOXA2Q1HG44 320 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 METTL23Q86XA0 190 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 PDCL2Q8N4E4 241 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 ATAD1Q8NBU5 361 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 GOLGA5Q8TBA6 731 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 FGF13Q92913 245 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 CCDC127Q96BQ5 260 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 ZCWPW1Q9H0M4 648 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 DMAC2Q9NW81 257 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 CEP72Q9P209 647 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 CDH7Q9ULB5 785 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 MAFFQ9ULX9 164 aa22.08■■□□□ 1.13
VTI1B-205ENST00000555543 GOLGA6L4A6NEF3 574 aa22.07■■□□□ 1.12
VTI1B-205ENST00000555543 NRG2O14511 850 aaPredicted RBP22.07■■□□□ 1.12
VTI1B-205ENST00000555543 TNNC2P02585 160 aa22.07■■□□□ 1.12
VTI1B-205ENST00000555543 DUSP4Q13115 394 aa22.07■■□□□ 1.12
VTI1B-205ENST00000555543 PNOCQ13519 176 aa22.07■■□□□ 1.12
VTI1B-205ENST00000555543 KCNB1Q14721 858 aa22.07■■□□□ 1.12
VTI1B-205ENST00000555543 SLC39A12Q504Y0 691 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms