RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TRABD2AQ86V40 505 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 CCDC125Q86Z20 511 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 WNK4Q96J92 1243 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 CLPTM1LQ96KA5 538 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 CCDC134Q9H6E4 229 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 BRD2P25440 801 aaKnown RBP18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 MXRA7P84157 204 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 CCDC89Q8N998 374 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 MAGEC3Q8TD91 643 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 TCHPQ9BT92 498 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 MECRQ9BV79 373 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 ARL8BQ9NVJ2 186 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 HEY2Q9UBP5 337 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 SERPINA10Q9UK55 444 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 CHMP2BQ9UQN3 213 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 LRRIQ4A6NIV6 560 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 MAPK13O15264 365 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 DHX15O43143 795 aaKnown RBP18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 SMIM24O75264 130 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 RPS6P62753 249 aaKnown RBP18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 BASP1P80723 227 aaKnown RBP18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 NFX1Q12986 1120 aaKnown RBP18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 BIRC2Q13490 618 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 PRAMEF18Q5VWM3 479 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 CRELD2Q6UXH1 353 aaPredicted RBP18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 TCP10LQ8TDR4 215 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 MAML1Q92585 1016 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 AGTPBP1Q9UPW5 1226 aa18.02■□□□□ 0.47
PPP4R3A-208ENST00000555462 ASMTLO95671 621 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 GGPS1O95749 300 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 LINGO3P0C6S8 592 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 KPNB1Q14974 876 aaKnown RBP18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 RCN1Q15293 331 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 TMEM154Q6P9G4 183 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 C3orf62Q6ZUJ4 267 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 NLRX1Q86UT6 975 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZC3H18Q86VM9 953 aaKnown RBP18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 CTAGE3PQ8IX95 158 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 HIPK4Q8NE63 616 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 SHKBP1Q8TBC3 707 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 SLC7A6OSQ96CW6 309 aaPredicted RBP18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 CTDP1Q9Y5B0 961 aaPredicted RBP18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 MYPNQ86TC9 1320 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 SERPINB3P29508 390 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 MAMLD1Q13495 774 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 GMCL1P1Q8NEA9 526 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 OR5B17Q8NGF7 314 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 JDP2Q8WYK2 163 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZNF75CPQ92670 426 aaPredicted RBP18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 MASTLQ96GX5 879 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 SYT15Q9BQS2 421 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 TMEM8AQ9HCN3 771 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
PPP4R3A-208ENST00000555462 TOP3BO95985 862 aaKnown RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 CD48P09326 243 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 UBTFL6P0CB48 400 aaPredicted RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 ZCCHC18P0CG32 403 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 POLE2P56282 527 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 RIPK1Q13546 671 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 TAF5Q15542 800 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 FNBP1LQ5T0N5 605 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 ANO7Q6IWH7 933 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 PPP1R21Q6ZMI0 780 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 NETO2Q8NC67 525 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 FBXO27Q8NI29 283 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 RMDN3Q96TC7 470 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 MIPEPQ99797 713 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 TMEM109Q9BVC6 243 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 SLC13A1Q9BZW2 595 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 APOBEC3GQ9HC16 384 aaKnown RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 HOXA7P31268 230 aaPredicted RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 GBP1P32455 592 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 LIG4P49917 911 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 EFCAB3Q8N7B9 438 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 GBP7Q8N8V2 638 aaPredicted RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 FAM111AQ96PZ2 611 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 PPP1R16BQ96T49 567 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 STRA6Q9BX79 667 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 TXLNGQ9NUQ3 528 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 SMNDC1O75940 238 aaKnown RBP eCLIP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 ALDH3A1P30838 453 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 KDSRQ06136 332 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 CYP24A1Q07973 514 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 TDRD10Q5VZ19 366 aaKnown RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 RHOT1Q8IXI2 618 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 SEPT12Q8IYM1 358 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 VPS52Q8N1B4 723 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 GRK7Q8WTQ7 553 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 RNPEPL1Q9HAU8 725 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 PIH1D1Q9NWS0 290 aaKnown RBP18■□□□□ 0.47
PPP4R3A-208ENST00000555462 USH1CQ9Y6N9 552 aa18■□□□□ 0.47
PPP4R3A-208ENST00000555462 PROSCO94903 275 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 BAG2O95816 211 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 TPBGLP0DKB5 382 aa17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 UNGP13051 313 aaPredicted RBP17.99■□□□□ 0.47
PPP4R3A-208ENST00000555462 CETN2P41208 172 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms