RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 MTDHQ86UE4 582 aaKnown RBP16.92■□□□□ 0.3
MARK3-209ENST00000555235 UCMAQ8WVF2 138 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 SCG3Q8WXD2 468 aaKnown RBP16.92■□□□□ 0.3
MARK3-209ENST00000555235 ZNF75CPQ92670 426 aaPredicted RBP16.92■□□□□ 0.3
MARK3-209ENST00000555235 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 BICD1Q96G01 975 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 HERPUD2Q9BSE4 406 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 CADM1Q9BY67 442 aaKnown RBP16.92■□□□□ 0.3
MARK3-209ENST00000555235 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
MARK3-209ENST00000555235 SAYSD1Q9NPB0 183 aa16.92■□□□□ 0.3
MARK3-209ENST00000555235 MAGEA13PA6NCF6 341 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 POC1B-GALNT4F8VUJ3 575 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 DDX39AO00148 427 aaKnown RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 TYROBPO43914 113 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 GTF2BQ00403 316 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 LRRC74BQ6ZQY2 392 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 C4orf33Q8N1A6 199 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 DDX27Q96GQ7 796 aaKnown RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 FGD4Q96M96 766 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 FAM192AQ9GZU8 254 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 ST6GALNAC4Q9H4F1 302 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 NPHS2Q9NP85 383 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 AVENQ9NQS1 362 aaPredicted RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 ZNF536O15090 1300 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 ATP9AO75110 1047 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 ADRB2P07550 413 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 RALAP11233 206 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 ITGB5P18084 799 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 KLRC2P26717 231 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 SLC1A5Q15758 541 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 P3H1Q32P28 736 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 RFWD3Q6PCD5 774 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 GSTA5Q7RTV2 222 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 SESTD1Q86VW0 696 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 TIPINQ9BVW5 301 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 MMADHCQ9H3L0 296 aaPredicted RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 SYNCQ9H7C4 482 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.91■□□□□ 0.3
MARK3-209ENST00000555235 SLC24A2Q9UI40 661 aa16.91■□□□□ 0.3
MARK3-209ENST00000555235 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
MARK3-209ENST00000555235 SCN9AQ15858 1988 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 HAUS5O94927 633 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 KCNA3P22001 575 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 RARRES1P49788 294 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 CLEC16AQ2KHT3 1053 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 PCNX4Q63HM2 1172 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 LVRNQ6Q4G3 990 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 DSTYKQ6XUX3 929 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 HAUS6Q7Z4H7 955 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 ZC3H18Q86VM9 953 aaKnown RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 HELQQ8TDG4 1101 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 STMN2Q93045 179 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 TRIM11Q96F44 468 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 PDP2Q9P2J9 529 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 STX18Q9P2W9 335 aaKnown RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 ZHX2Q9Y6X8 837 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 ZNF646O15015 1829 aaPredicted RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 CAPN9O14815 690 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 PSTPIP1O43586 416 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 ZBED4O75132 1171 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 MYBL1P10243 752 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 DYNC1I2Q13409 638 aaKnown RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 GSTA3Q16772 222 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 DDX1Q92499 740 aaKnown RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 MCUR1Q96AQ8 359 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 MASTLQ96GX5 879 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
MARK3-209ENST00000555235 PSMC3IPQ9P2W1 217 aaPredicted RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 ZNF212Q9UDV6 495 aa16.9■□□□□ 0.3
MARK3-209ENST00000555235 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.9■□□□□ 0.3
MARK3-209ENST00000555235 GOLGA8IPA6NC78 632 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 GOLGA8JA6NMD2 632 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 GYG2O15488 501 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 GSC2O15499 205 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 GRIN3BO60391 1043 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 TJP3O95049 919 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 PSMG1O95456 288 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 ADSSP30520 456 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 AP1B1Q10567 949 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 KPNB1Q14974 876 aaKnown RBP16.89■□□□□ 0.29
MARK3-209ENST00000555235 ACSBG2Q5FVE4 666 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 HEMGNQ9BXL5 484 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 HERC5Q9UII4 1024 aaKnown RBP16.89■□□□□ 0.29
MARK3-209ENST00000555235 COQ4Q9Y3A0 265 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 DNALI1O14645 258 aaPredicted RBP16.89■□□□□ 0.29
MARK3-209ENST00000555235 NDC80O14777 642 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 CACNA2D1P54289 1103 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 POLE2P56282 527 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 CUL3Q13618 768 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
MARK3-209ENST00000555235 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 LDHDQ86WU2 507 aa16.89■□□□□ 0.29
MARK3-209ENST00000555235 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms