RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ARNT2Q9HBZ2 717 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 CHST12Q9NRB3 414 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 BCCIPQ9P287 314 aaKnown RBP eCLIP6.67□□□□□ -1.34
VRK1-203ENST00000555067 PRAMEF33A0A0G2JMD5 474 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 GRM6O15303 877 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 SGTAO43765 313 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 SH3BP5O60239 455 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 PRAMEF10O60809 474 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 KATNA1O75449 491 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 MATN4O95460 622 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 LDHAP00338 332 aaKnown RBP6.66□□□□□ -1.34
VRK1-203ENST00000555067 SRGNP10124 158 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 KCNA2P16389 499 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 CTGFP29279 349 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 RAB27AP51159 221 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 TARDBPQ13148 414 aaKnown RBP eCLIP6.66□□□□□ -1.344e-8■■■□□ 15.1
VRK1-203ENST00000555067 OS9Q13438 667 aaPredicted RBP6.66□□□□□ -1.34
VRK1-203ENST00000555067 SF3B3Q15393 1217 aaKnown RBP6.66□□□□□ -1.34
VRK1-203ENST00000555067 NBPF8Q3BBV2 869 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 KIAA0895LQ68EN5 471 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 GRASPQ7Z6J2 395 aaPredicted RBP6.66□□□□□ -1.34
VRK1-203ENST00000555067 CNTD1Q8N815 330 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 HDAC10Q969S8 669 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 INTS13Q9NVM9 706 aa6.66□□□□□ -1.34
VRK1-203ENST00000555067 CCDC151A5D8V7 595 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 DNAJC9-AS1A6NH13 148 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 PROM1O43490 865 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 NDUFS2O75306 463 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 C1QL1O75973 258 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 CENPBP07199 599 aaPredicted RBP6.65□□□□□ -1.34
VRK1-203ENST00000555067 SLC6A4P31645 630 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 RPS7P62081 194 aaKnown RBP6.65□□□□□ -1.34
VRK1-203ENST00000555067 ZNF844Q08AG5 666 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 HDAC1Q13547 482 aaPredicted RBP6.65□□□□□ -1.34
VRK1-203ENST00000555067 C1QL2Q7Z5L3 287 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 C11orf96Q7Z7L8 435 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 IFI44Q8TCB0 444 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 ZNF384Q8TF68 577 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 SMG7Q92540 1137 aaKnown RBP6.65□□□□□ -1.34
VRK1-203ENST00000555067 UROC1Q96N76 676 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 ASPSCR1Q9BZE9 553 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 KLK15Q9H2R5 256 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 SLC5A4Q9NY91 659 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 RNF7Q9UBF6 113 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 CDYLQ9Y232 598 aa6.65□□□□□ -1.34
VRK1-203ENST00000555067 YY2O15391 372 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 MPPED1O15442 326 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 AGFG2O95081 481 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 ATF3P18847 181 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
VRK1-203ENST00000555067 MAPK7Q13164 816 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 RAB39AQ14964 217 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 INAVAQ3KP66 663 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 HSP90AB4PQ58FF6 505 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 KRTAP5-11Q6L8G4 156 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 PPP4R4Q6NUP7 873 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 VWA1Q6PCB0 445 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 CHPFQ8IZ52 775 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 MYO1HQ8N1T3 1032 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 C1orf162Q8NEQ5 155 aaPredicted RBP6.64□□□□□ -1.35
VRK1-203ENST00000555067 IL17RDQ8NFM7 739 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 TMEM125Q96AQ2 219 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 TLR10Q9BXR5 811 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 PACSIN1Q9BY11 444 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 PCGF6Q9BYE7 350 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 MKS1Q9NXB0 559 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 JKAMPQ9P055 326 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 TUBD1Q9UJT1 453 aa6.64□□□□□ -1.35
VRK1-203ENST00000555067 AKAP10O43572 662 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 MYL1P05976 194 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 UTP14CQ5TAP6 766 aaKnown RBP6.63□□□□□ -1.35
VRK1-203ENST00000555067 PPP4R3AQ6IN85 833 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 PGM2L1Q6PCE3 622 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 ZNF365Q70YC5 407 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 TTC8Q8TAM2 541 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 JADE3Q92613 823 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 C1QTNF7Q9BXJ2 289 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 MAF1Q9H063 256 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 TERF2IPQ9NYB0 399 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 ZIM2Q9NZV7 527 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.63□□□□□ -1.35
VRK1-203ENST00000555067 PNMA2Q9UL42 364 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 ENTPD2Q9Y5L3 495 aa6.63□□□□□ -1.35
VRK1-203ENST00000555067 CD1AP06126 327 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 IARSP41252 1262 aaKnown RBP6.62□□□□□ -1.35
VRK1-203ENST00000555067 FPGSQ05932 587 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 PIGFQ07326 219 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 AKNAD1Q5T1N1 836 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 KAZNQ674X7 775 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 CBARPQ8N350 705 aaPredicted RBP6.62□□□□□ -1.35
VRK1-203ENST00000555067 SAMD3Q8N6K7 520 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 AOPEPQ8N6M6 819 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 RAB24Q969Q5 203 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 TIMP4Q99727 224 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 ASB6Q9NWX5 421 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 CTTNBP2NLQ9P2B4 639 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 ARPP21Q9UBL0 812 aaPredicted RBP6.62□□□□□ -1.35
VRK1-203ENST00000555067 PCDHA13Q9Y5I0 950 aa6.62□□□□□ -1.35
VRK1-203ENST00000555067 CCDC195A0A1B0GUA6 201 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms