RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PDZK1P1A8MUH7 402 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 hCG_1984214I3L0E3 225 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TNNI3P19429 210 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EIF4A1P60842 406 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF713Q8N859 430 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MOV10L1Q9BXT6 1211 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PARD6BQ9BYG5 372 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SHCBP1LQ9BZQ2 653 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PADI4Q9UM07 663 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EEF2KO00418 725 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PRKCBP05771 671 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 APRTP07741 180 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ALDH9A1P49189 494 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 OTOAQ7RTW8 1153 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EPHX4Q8IUS5 362 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RBBP8Q99708 897 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ABCB6Q9NP58 842 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SCN3BQ9NY72 215 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EVPLLA8MZ36 301 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ASNSP08243 561 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RABGAP1LQ5R372 815 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TMC4Q7Z404 712 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 GATAD2AQ86YP4 633 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 EME1Q96AY2 570 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 SIK3Q9Y2K2 1263 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 NOS3P29474 1203 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 HARS2P49590 506 aaKnown RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 NCF4Q15080 339 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF589Q86UQ0 364 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ZSCAN18Q8TBC5 510 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 FAM136AQ96C01 138 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PANX2Q96RD6 677 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ETNK1Q9HBU6 452 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TMEM260Q9NX78 707 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 GGT7Q9UJ14 662 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MBL2P11226 248 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ITGA3P26006 1051 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 TIGD7Q6NT04 549 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RNF44Q7L0R7 432 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 NLRP10Q86W26 655 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 MCEEQ96PE7 176 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 RNF26Q9BY78 433 aaPredicted RBP7.19□□□□□ -1.26
SYNE2-216ENST00000555002 PCDHGA3Q9Y5H0 932 aa7.19□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF682O95780 498 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 LBPP18428 481 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 GGCXP38435 758 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CSTF3Q12996 717 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CPVLQ9H3G5 476 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 KIAA1586Q9HCI6 787 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 STOML1Q9UBI4 398 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ZMYM4Q5VZL5 1548 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ARAP3Q8WWN8 1544 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CLTBP09497 229 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 RSBN1Q5VWQ0 802 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 C16orf89Q6UX73 402 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 RTL3Q8N8U3 475 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 GPT2Q8TD30 523 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 RP1L1Q8IWN7 2480 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 A0A1W2PQ27 194 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 A0A1W2PQ64 194 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 A0A1W2PQD8 194 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TRIM49BA6NDI0 452 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 POLRMTO00411 1230 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 PCDH8O95206 1070 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CHRM3P20309 590 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 OR1G1P47890 313 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TMED10P49755 219 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF157P51786 506 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TAF1CQ15572 869 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 GOLGA7BQ2TAP0 167 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 IZUMO1Q8IYV9 350 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MRPL48Q96GC5 212 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TLR7Q9NYK1 1049 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 UVRAGQ9P2Y5 699 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 AGO2Q9UKV8 859 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 JAK1P23458 1154 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CDC27P30260 824 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 KCNK10P57789 538 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 EAF2Q96CJ1 260 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 BTBD9Q96Q07 612 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 GOLPH3LQ9H4A5 285 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 PLXNC1O60486 1568 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MMP1P03956 469 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 PTPN7P35236 360 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 PPP2R2AP63151 447 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MTMR2Q13614 643 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 NOL9Q5SY16 702 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 HLA-DQA1Q5Y7H0 255 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 IPCEF1Q8WWN9 437 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 NACC2Q96BF6 587 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 FAR2Q96K12 515 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TNIP3Q96KP6 325 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 OXCT2Q9BYC2 517 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ELL3Q9HB65 397 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 SNX6Q9UNH7 406 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms