RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PAWR	Q96IZ0	340 aa	Known RBP	6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	MNT	Q99583	582 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZNF277	Q9NRM2	450 aa	Predicted RBP	6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	CEP72	Q9P209	647 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	CARMIL3	Q8ND23	1372 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	C4A	P0C0L4	1744 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	TRIM75P	A6NK02	468 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	GABRD	O14764	452 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	MCAM	P43121	646 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	FOXE3	Q13461	319 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	NOMO1	Q15155	1222 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	CSRP2	Q16527	193 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	MFSD14B	Q5SR56	506 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	IGFL4	Q6B9Z1	124 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	TRMT2A	Q8IZ69	625 aa	Known RBP	6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956		Q8N1X5	172 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	PPM1N	Q8N819	430 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	OR2I1P	Q8NGU4	316 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	CACTIN	Q8WUQ7	758 aa	Known RBP	6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	HOXB13	Q92826	284 aa	Predicted RBP	6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZNF503	Q96F45	646 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	PHACTR3	Q96KR7	559 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	PLEKHG4B	Q96PX9	1271 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	SMAD5	Q99717	465 aa	Known RBP	6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	ADI1	Q9BV57	179 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	LDAH	Q9H6V9	325 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	RBM12	Q9NTZ6	932 aa	Known RBP	6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	RNF181	Q9P0P0	153 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	NARF	Q9UHQ1	456 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	ADAMTS7	Q9UKP4	1686 aa		6.6	□□□□□ -1.35
PSMC6-208	ENST00000554956	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	COL5A3	P25940	1745 aa	Predicted RBP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	FZD9	O00144	591 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA12	O60330	932 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	SERPINB2	P05120	415 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	C6	P13671	934 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	ECHS1	P30084	290 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	CRHR1	P34998	444 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	EIF5	P55010	431 aa	Known RBP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZXDA	P98168	799 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	SEPT2	Q15019	361 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	ACAP2	Q15057	778 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCBP2	Q15366	365 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	ANO4	Q32M45	955 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	TBC1D9B	Q66K14	1250 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	CRIP3	Q6Q6R5	217 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	RPUSD2	Q8IZ73	545 aa	Known RBP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	OR7D4	Q8NG98	312 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	OR52N2	Q8NGI0	321 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	JADE3	Q92613	823 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZNF341	Q9BYN7	854 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	CSRNP2	Q9H175	543 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	METTL14	Q9HCE5	456 aa	Known RBP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	MKS1	Q9NXB0	559 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZBTB21	Q9ULJ3	1066 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	DNM3	Q9UQ16	869 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA9	Q9Y5G4	932 aa	Known RBP	6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA8	Q9Y5G5	932 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA7	Q9Y5G6	932 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA6	Q9Y5G7	932 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA3	Q9Y5H0	932 aa		6.59	□□□□□ -1.35
PSMC6-208	ENST00000554956	COL3A1	P02461	1466 aa	Predicted RBP	6.59	□□□□□ -1.36
PSMC6-208	ENST00000554956	MRC1	P22897	1456 aa		6.59	□□□□□ -1.36
PSMC6-208	ENST00000554956	TJP1	Q07157	1748 aa		6.59	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZNF831	Q5JPB2	1677 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	COL15A1	P39059	1388 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	XDH	P47989	1333 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	FAM20B	O75063	409 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	PHF2	O75151	1096 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	A1BG	P04217	495 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	GSPT1	P15170	499 aa	Known RBP	6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	TACR2	P21452	398 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	PTPN7	P35236	360 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	PIP4K2A	P48426	406 aa	Predicted RBP	6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	SLC25A3	Q00325	362 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	PTH1R	Q03431	593 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	TOB2	Q14106	344 aa	Predicted RBP	6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	MIIP	Q5JXC2	388 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	HTR3D	Q70Z44	454 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	DOK3	Q7L591	496 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	DPF2	Q92785	391 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	FAXDC2	Q96IV6	333 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	UHRF1	Q96T88	793 aa	Predicted RBP	6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	KCNH6	Q9H252	994 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	TUBD1	Q9UJT1	453 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	HDAC5	Q9UQL6	1122 aa		6.58	□□□□□ -1.36
PSMC6-208	ENST00000554956	KIF13B	Q9NQT8	1826 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	GRXCR1	A8MXD5	290 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	ALG1L2	C9J202	215 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	NPIPB8	E9PQR5	432 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	XPOT	O43592	962 aa	Known RBP	6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	GAST	P01350	101 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	RBP3	P10745	1247 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	C5AR1	P21730	350 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	SREBF1	P36956	1147 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	DCAF17	Q5H9S7	520 aa	Predicted RBP	6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZNF790	Q6PG37	636 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	GPRIN1	Q7Z2K8	1008 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	FAM83A	Q86UY5	434 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	C2CD5	Q86YS7	1000 aa		6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms