RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 RAD54LQ92698 747 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 BICD1Q96G01 975 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 PGLYRP2Q96PD5 576 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 TSPAN18Q96SJ8 248 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 MKNK1Q9BUB5 465 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 BRD9Q9H8M2 597 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 RPF1Q9H9Y2 349 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 TISP43B9A030 160 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 PIRO00625 290 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 TRAK2O60296 914 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 LILRB5O75023 590 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 FAM13AO94988 1023 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 TDGF1P13385 188 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 PSMC3P17980 439 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 TYMPP19971 482 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 NMT1P30419 496 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 GDI1P31150 447 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 UBA7P41226 1012 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 PPP2R3AQ06190 1150 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 MTAPQ13126 283 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 MYBPC2Q14324 1141 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 C9orf57Q5W0N0 161 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 TSSK4Q6SA08 328 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 DSTYKQ6XUX3 929 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 GAREM2Q75VX8 874 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 ERMP1Q7Z2K6 904 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 MFSD6LQ8IWD5 586 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 ELMOD1Q8N336 334 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 ATAD1Q8NBU5 361 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 LEMD2Q8NC56 503 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 RUBCNQ92622 972 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 CALML4Q96GE6 196 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 SENP8Q96LD8 212 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 LRRC3BQ96PB8 259 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 IKZF4Q9H2S9 585 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 PRMT8Q9NR22 394 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 ASAH2Q9NR71 780 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 PCDHGA2Q9Y5H1 932 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 STYXL1Q9Y6J8 313 aa13.27□□□□□ -0.29
MTHFD1-207ENST00000554677 MTMR11A4FU01 709 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 HEPACAM2A8MVW5 462 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 K7ENM7 598 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 MAN2B1O00754 1011 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 NCAM2O15394 837 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 SOAT2O75908 522 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 NFICP08651 508 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 SCP2P22307 547 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 DDIT3P35638 169 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 ACOT2P49753 483 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 SF3A1Q15459 793 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 STXBP5Q5T5C0 1151 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 OVOS1Q6IE37 1185 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 SPAG17Q6Q759 2223 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 CRELD2Q6UXH1 353 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 DNAJB7Q7Z6W7 309 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 CD302Q8IX05 232 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 OR10T2Q8NGX3 314 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 DEPDC1BQ8WUY9 529 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 IRF7Q92985 503 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 BORCS6Q96GS4 357 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 MSTO1Q9BUK6 570 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 CCSER1Q9C0I3 900 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 CHRDQ9H2X0 955 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 ZSCAN32Q9NX65 697 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 MRPS17Q9Y2R5 130 aaKnown RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 NCOR2Q9Y618 2525 aa13.26□□□□□ -0.29
MTHFD1-207ENST00000554677 TPRP12270 2363 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 OBSL1O75147 1896 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 A0A1W2PRU2 124 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 XPOTO43592 962 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 CYP11A1P05108 521 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 CHRNB1P11230 501 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 ADSSP30520 456 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 MCM2P49736 904 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 GAS6Q14393 721 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 PTPAQ15257 358 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 ZNF720Q7Z2F6 126 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 USP37Q86T82 979 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 FAM3CQ92520 227 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 LARP4BQ92615 738 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 PSMG2Q969U7 264 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 FAM212AQ96EL1 285 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
MTHFD1-207ENST00000554677 STRA6Q9BX79 667 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms