RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HMX2A2RU54 273 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 FAM159BA6NKW6 160 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 TARM1B6A8C7 271 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L15C9J2P7 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L13C9JLJ4 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L11C9JVI0 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L18D6R9N7 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L22D6RA61 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L17D6RBQ6 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L19D6RCP7 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L20D6RJB6 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 F8W8V4 182 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 MDM4O15151 490 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CHADO15335 359 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 BIRC5O15392 142 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 EDF1O60869 148 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 DGAT1O75907 488 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SGPL1O95470 568 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CLTAP09496 248 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 MLNP12872 115 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC130P13994 396 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 NPTX2P47972 431 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 POLD2P49005 469 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 WDR4P57081 412 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 DR1Q01658 176 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L24Q0WX57 530 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC40Q4G0X9 1142 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SLC45A4Q5BKX6 768 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 USP17L6PQ6QN14 398 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 LDHDQ86WU2 507 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 PROCA1Q8NCQ7 364 aaPredicted RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CYP2W1Q8TAV3 490 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ADAMTS16Q8TE57 1224 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SCG3Q8WXD2 468 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 RIN2Q8WYP3 895 aaPredicted RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SYTL4Q96C24 671 aaPredicted RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CNDP1Q96KN2 507 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC85AQ96PX6 553 aaPredicted RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SLC4A5Q9BY07 1137 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 UBA5Q9GZZ9 404 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 MTFR1LQ9H019 292 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 VPS11Q9H270 941 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 GPAMQ9HCL2 828 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SLC40A1Q9NP59 571 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CYP39A1Q9NYL5 469 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ABCF2Q9UG63 623 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 TCRBV7S2A1N4TA0A589 114 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 HAS3O00219 553 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 TTI1O43156 1089 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 THAP12O43422 761 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 PEX1O43933 1283 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 MAGEC1O60732 1142 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 DKC1O60832 514 aaKnown RBP eCLIP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CAND2O75155 1236 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ATP6V1G2O95670 118 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 INPP5BP32019 993 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 CPOXP36551 454 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 HCAR3P49019 387 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 FOSBP53539 338 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 AIF1P55008 147 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 XIAPP98170 497 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 GNL2Q13823 731 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ZRSR1Q15695 479 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SPATS1Q496A3 300 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 RAB41Q5JT25 222 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 KCTD11Q693B1 232 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 LRRC47Q8N1G4 583 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 GPD1LQ8N335 351 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ZSWIM2Q8NEG5 633 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SPDYE1Q8NFV5 336 aaPredicted RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 RASSF8Q8NHQ8 419 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 UBXN10Q96LJ8 280 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 NCAPGQ9BPX3 1015 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SLC2A11Q9BYW1 496 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 RETREG1Q9H6L5 497 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ACSS3Q9H6R3 686 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ARHGEF10LQ9HCE6 1279 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 BATF3Q9NR55 127 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 STRIP2Q9ULQ0 834 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 SMG5Q9UPR3 1016 aaKnown RBP3.67□□□□□ -1.82
SEC23A-207ENST00000554615 TTLL3Q9Y4R7 772 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 NR2E3Q9Y5X4 410 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 PCM1Q15154 2024 aa3.67□□□□□ -1.82
SEC23A-207ENST00000554615 ENO4A6NNW6 628 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 WDR64B1ANS9 1081 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 RASA4BC9J798 803 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 IPO5O00410 1097 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TRDMT1O14717 391 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TRIM66O15016 1216 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 RASA4O43374 803 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 BUD23O43709 281 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GCATO75600 419 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SPAG6O75602 509 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SMNDC1O75940 238 aaKnown RBP eCLIP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 LDHAP00338 332 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ACADSP16219 412 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CD9P21926 228 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 COMTP21964 271 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms