RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SLC39A4Q6P5W5 647 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 TMC6Q7Z403 805 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 VSTM4Q8IW00 320 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 CD302Q8IX05 232 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 UBALD2Q8IYN6 164 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 POMGNT1Q8WZA1 660 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 ZNF707Q96C28 371 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-214ENST00000554604 SUSD3Q96L08 255 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 TSPAN18Q96SJ8 248 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 LRRC27Q9C0I9 530 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 RWDD2AQ9UIY3 292 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 AGO2Q9UKV8 859 aaKnown RBP13.44□□□□□ -0.26
SHMT2-214ENST00000554604 POLIQ9UNA4 740 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 BACE2Q9Y5Z0 518 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 TISP43B9A030 160 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 TULP1O00294 542 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-214ENST00000554604 FAM189A1O60320 539 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 XYLBO75191 536 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CYP3A5P20815 502 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
SHMT2-214ENST00000554604 ELF1P32519 619 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 PPP1R2P41236 205 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 ACOT2P49753 483 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 ARPP19P56211 112 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CCZ1BP86790 482 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CNNM4Q6P4Q7 775 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 SUGP1Q8IWZ8 645 aaKnown RBP13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CCDC65Q8IXS2 484 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 SYCP3Q8IZU3 236 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 APPL2Q8NEU8 664 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 BEST2Q8NFU1 509 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 SLC7A14Q8TBB6 771 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 ACCSQ96QU6 501 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 OLFML3Q9NRN5 406 aa13.43□□□□□ -0.26
SHMT2-214ENST00000554604 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
SHMT2-214ENST00000554604 WDFY4Q6ZS81 3184 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 CCL16O15467 120 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 LRPAP1P30533 357 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 HOXA9P31269 272 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 PAK1Q13153 545 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 ALCAMQ13740 583 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 ZBTB6Q15916 424 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 KMT5BQ4FZB7 885 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 CTXN3Q4LDR2 81 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 JADE1Q6IE81 842 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 ZNF280DQ6N043 979 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 RSPO2Q6UXX9 243 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-214ENST00000554604 GET4Q7L5D6 327 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-214ENST00000554604 BMP8AQ7Z5Y6 402 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 GRASPQ7Z6J2 395 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-214ENST00000554604 USP37Q86T82 979 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 ADSSL1Q8N142 457 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 TMEM130Q8N3G9 435 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-214ENST00000554604 TRIM9Q9C026 710 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 SAMSN1Q9NSI8 373 aaKnown RBP13.42□□□□□ -0.26
SHMT2-214ENST00000554604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHMT2-214ENST00000554604 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 STYXL1Q9Y6J8 313 aa13.42□□□□□ -0.26
SHMT2-214ENST00000554604 NOTCH4Q99466 2003 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 PRRG1O14668 218 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 NRDCO43847 1150 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 PPP1R37O75864 691 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 PAPLNO95428 1278 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 ADRB2P07550 413 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 FSHRP23945 695 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 GUCY2FP51841 1108 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 ROR1Q01973 937 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 KCNA1Q09470 495 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 STIM1Q13586 685 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 ARID5BQ14865 1188 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 NR1I3Q14994 352 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 DSTYKQ6XUX3 929 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 SMYD4Q8IYR2 804 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-214ENST00000554604 FBXL6Q8N531 539 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 ZNF461Q8TAF7 563 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 FAM122AQ96E09 287 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 IKZF4Q9H2S9 585 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 ASB7Q9H672 318 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 KCNK12Q9HB15 430 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 INTS13Q9NVM9 706 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 IGSF9Q9P2J2 1179 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 FBXL5Q9UKA1 691 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 DERAQ9Y315 318 aa13.41□□□□□ -0.26
SHMT2-214ENST00000554604 ARIH1Q9Y4X5 557 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-214ENST00000554604 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
SHMT2-214ENST00000554604 FRMD3A2A2Y4 597 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms