RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 PCDHB14Q9Y5E9 798 aa7.43□□□□□ -1.22
KTN1-213ENST00000554306 FRMPD3Q5JV73 1810 aa7.43□□□□□ -1.22
KTN1-213ENST00000554306 SSBP05455 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
KTN1-213ENST00000554306 MMP3P08254 477 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 MYL3P08590 195 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 C6orf222P0C671 652 aaPredicted RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 TMEM253P0C7T8 217 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 XRCC6P12956 609 aaKnown RBP eCLIP7.42□□□□□ -1.22
KTN1-213ENST00000554306 SLC26A2P50443 739 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 RAD51AP2Q09MP3 1159 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 GRB10Q13322 594 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 MRPL58Q14197 206 aaKnown RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 FSCN1Q16658 493 aaKnown RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 HSDL1Q3SXM5 330 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 FBLN7Q53RD9 439 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 ARSHQ5FYA8 562 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 HYIQ5T013 277 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 TMEM63BQ5T3F8 832 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 GJC2Q5T442 439 aaPredicted RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 MAP3K21Q5TCX8 1036 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 SPOCD1Q6ZMY3 1216 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 PLPPR4Q7Z2D5 763 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 CILP2Q8IUL8 1156 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 C4orf19Q8IY42 314 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 ANKS4BQ8N8V4 417 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 PCSK9Q8NBP7 692 aaKnown RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 FAM167AQ96KS9 214 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 TIGD1Q96MW7 591 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 HSD17B14Q9BPX1 270 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 LXNQ9BS40 222 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 MMTAG2Q9BU76 263 aaKnown RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 RNF32Q9H0A6 362 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 SLC6A17Q9H1V8 727 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 GOLPH3LQ9H4A5 285 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 SP110Q9HB58 689 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 XPNPEP3Q9NQH7 507 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 DACT1Q9NYF0 836 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 GGT7Q9UJ14 662 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 ZNF215Q9UL58 517 aaPredicted RBP7.42□□□□□ -1.22
KTN1-213ENST00000554306 ARID2Q68CP9 1835 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 MYH11P35749 1972 aa7.42□□□□□ -1.22
KTN1-213ENST00000554306 IGKV6D-21A0A0A0MT36 114 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 SHISA3A0PJX4 238 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 ARHGEF35A5YM69 484 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 CTAGE5O15320 804 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 LYPLA2O95372 231 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 EYA4O95677 639 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 PGK1P00558 417 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 LGALS2P05162 132 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 KRT18P05783 430 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 C1QTNF9P0C862 333 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 PLA2G4BP0C869 781 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 CCL5P13501 91 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 YWHABP31946 246 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 TRHRP34981 398 aaPredicted RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 GJA9P57773 515 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 TEKQ02763 1124 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 SNW1Q13573 536 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 DHX8Q14562 1220 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 KLHL40Q2TBA0 621 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 LONRF3Q496Y0 759 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 TMEM119Q4V9L6 283 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 XKR3Q5GH77 459 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 KRBA2Q6ZNG9 492 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 TRMT1LQ7Z2T5 733 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 RNF180Q86T96 592 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 EXOC8Q8IYI6 725 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 ARRDC4Q8NCT1 418 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 ENGASEQ8NFI3 743 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 GPT2Q8TD30 523 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 AFAP1L1Q8TED9 768 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 LARP4BQ92615 738 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 RAD54LQ92698 747 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 CCDC47Q96A33 483 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 KATNAL1Q9BW62 490 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.41□□□□□ -1.22
KTN1-213ENST00000554306 UPF3AQ9H1J1 476 aaKnown RBP7.41□□□□□ -1.22
KTN1-213ENST00000554306 NUP62CLQ9H1M0 184 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 TNMDQ9H2S6 317 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 ANKEF1Q9NU02 776 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 ERAP1Q9NZ08 941 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 EMSYQ7Z589 1322 aa7.41□□□□□ -1.22
KTN1-213ENST00000554306 E9PMD0 336 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 ADCY6O43306 1168 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 HBP1O60381 514 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 UBOX5O94941 541 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 LETM1O95202 739 aaPredicted RBP7.4□□□□□ -1.22
KTN1-213ENST00000554306 SMC2O95347 1197 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 MARK3P27448 753 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 CFPP27918 469 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 BEX3Q00994 111 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 PRKCEQ02156 737 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 SNX17Q15036 470 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 UGCGQ16739 394 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 XKR9Q5GH70 373 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 CCDC183Q5T5S1 534 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 CDCP2Q5VXM1 449 aa7.4□□□□□ -1.22
KTN1-213ENST00000554306 RNF111Q6ZNA4 994 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms