RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CISHQ9NSE2 258 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TBC1D13Q9NVG8 400 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 MIOSQ9NXC5 875 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 NOCTQ9UK39 431 aaKnown RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 BARX2Q9UMQ3 279 aaPredicted RBP8.18□□□□□ -1.1
TDP1-209ENST00000554180 INPP5FQ9Y2H2 1132 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 PCDHB4Q9Y5E5 795 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 SNX9Q9Y5X1 595 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ADGRG1Q9Y653 693 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TTC3P53804 2025 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 TET1Q8NFU7 2136 aa8.18□□□□□ -1.1
TDP1-209ENST00000554180 ZNF500O60304 480 aaPredicted RBP8.17□□□□□ -1.1
TDP1-209ENST00000554180 HUS1O60921 280 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 POMCP01189 267 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 AMHP03971 560 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 WEE2P0C1S8 567 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 FGFR1P11362 822 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 CD58P19256 250 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 GNA15P30679 374 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 CLCNKBP51801 687 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 AFF1P51825 1210 aaKnown RBP8.17□□□□□ -1.1
TDP1-209ENST00000554180 CDR2Q01850 454 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 RNASELQ05823 741 aaKnown RBP8.17□□□□□ -1.1
TDP1-209ENST00000554180 FPGSQ05932 587 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 PPP1R2P3Q6NXS1 205 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 PSRC1Q6PGN9 363 aaPredicted RBP8.17□□□□□ -1.1
TDP1-209ENST00000554180 DCLRE1AQ6PJP8 1040 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 SCARA5Q6ZMJ2 495 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 SLC47A2Q86VL8 602 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 COLGALT2Q8IYK4 626 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 CCAR2Q8N163 923 aaKnown RBP8.17□□□□□ -1.1
TDP1-209ENST00000554180 TMEM86AQ8N2M4 240 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 LRRC43Q8N309 656 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 APPL2Q8NEU8 664 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 SLC30A5Q8TAD4 765 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
TDP1-209ENST00000554180 ELMO3Q96BJ8 720 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 CASD1Q96PB1 797 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 MMS19Q96T76 1030 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 AGPAT1Q99943 283 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 ADAMTS1Q9UHI8 967 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 NENFQ9UMX5 172 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 POLIQ9UNA4 740 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 PPP2R2CQ9Y2T4 447 aa8.17□□□□□ -1.1
TDP1-209ENST00000554180 A0A087X0T9 212 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 CASTOR2A6NHX0 329 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 M0QZQ0 153 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 DDX3XO00571 662 aaKnown RBP eCLIP8.16□□□□□ -1.15e-8■■□□□ 12.6
TDP1-209ENST00000554180 SPTLC1O15269 473 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 CAPN15O75808 1086 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 B3GAT3O94766 335 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 LSM8O95777 96 aaKnown RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 CYP11A1P05108 521 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 FAM228BP0C875 321 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 GZMAP12544 262 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 IBSPP21815 317 aaPredicted RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 WARSP23381 471 aaKnown RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 MKI67P46013 3256 aaKnown RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 VAV2P52735 878 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 WDR5P61964 334 aaKnown RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 FMO1Q01740 532 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 LTBP2Q14767 1821 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 STILQ15468 1287 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 SOWAHAQ2M3V2 549 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 ALKBH5Q6P6C2 394 aaKnown RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 GLYCTKQ8IVS8 523 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 ADGRF2Q8IZF7 708 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 C3orf58Q8NDZ4 430 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 OLIG1Q8TAK6 271 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 KBTBD7Q8WVZ9 684 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 TOP1MTQ969P6 601 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 TMEM176AQ96HP8 235 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 SUSD3Q96L08 255 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
TDP1-209ENST00000554180 TMEM175Q9BSA9 504 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 DESI2Q9BSY9 194 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.16□□□□□ -1.1
TDP1-209ENST00000554180 TSGA10Q9BZW7 698 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 SDCBP2Q9H190 292 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 SPTLC3Q9NUV7 552 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 NAGPAQ9UK23 515 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 DSEQ9UL01 958 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 INTUQ9ULD6 942 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 KIAA1257Q9ULG3 409 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 L1RE1Q9UN81 338 aa8.16□□□□□ -1.1
TDP1-209ENST00000554180 SCN5AQ14524 2016 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 MICAL3Q7RTP6 2002 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 TRIP11Q15643 1979 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 CYB561D2O14569 222 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 GABRDO14764 452 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 ZNF263O14978 683 aa8.15□□□□□ -1.1
TDP1-209ENST00000554180 PJA2O43164 708 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms