RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 HERC2P3Q9BVR0 1158 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 OAS3Q9Y6K5 1087 aaKnown RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 EVPLQ92817 2033 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 SETXQ7Z333 2677 aaKnown RBP7.71□□□□□ -1.17
ATXN3-224ENST00000554040 TGM5O43548 720 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 GNAQP50148 359 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 LIMK1P53667 647 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 CDC42EP1Q00587 391 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 DSG1Q02413 1049 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 ADCY1Q08828 1119 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 C19orf57Q0VDD7 668 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 SART3Q15020 963 aaKnown RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 TWF2Q6IBS0 349 aaKnown RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 PRR23BQ6ZRT6 265 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 TPRG1Q6ZUI0 275 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 PALB2Q86YC2 1186 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 RNF168Q8IYW5 571 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 CTCFLQ8NI51 663 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 URGCPQ8TCY9 931 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 IGDCC4Q8TDY8 1250 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 MAP4K1Q92918 833 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 PGBD4Q96DM1 585 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 SCLT1Q96NL6 688 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 FAM193BQ96PV7 902 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 GCOM2Q9BZD3 368 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 BHLHE41Q9C0J9 482 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 LY9Q9HBG7 655 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 LATS2Q9NRM7 1088 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 FAM105AQ9NUU6 356 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 RCAN3Q9UKA8 241 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 MRPS17Q9Y2R5 130 aaKnown RBP7.71□□□□□ -1.18
ATXN3-224ENST00000554040 C2orf16Q68DN1 1984 aa7.71□□□□□ -1.18
ATXN3-224ENST00000554040 SHISA7A6NL88 538 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 EFEMP2O95967 443 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 FOSP01100 380 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-224ENST00000554040 C1QTNF9P0C862 333 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF76P36508 570 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 GLUD2P49448 558 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 RAB27AP51159 221 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 SIM2Q14190 667 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-224ENST00000554040 PPP2R5DQ14738 602 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 ALKBH2Q6NS38 261 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-224ENST00000554040 LRSAM1Q6UWE0 723 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 AGMOQ6ZNB7 445 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 NIPA1Q7RTP0 329 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 GRASPQ7Z6J2 395 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-224ENST00000554040 MRPL10Q7Z7H8 261 aaKnown RBP7.7□□□□□ -1.18
ATXN3-224ENST00000554040 DTX1Q86Y01 620 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 SHKBP1Q8TBC3 707 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 FGF13Q92913 245 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 FAM167AQ96KS9 214 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 CHST7Q9NS84 486 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 DIAPH3Q9NSV4 1193 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 MARCH5Q9NX47 278 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 GABBR1Q9UBS5 961 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 PCDHA10Q9Y5I2 948 aa7.7□□□□□ -1.18
ATXN3-224ENST00000554040 WDFY3Q8IZQ1 3526 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 ASXL3Q9C0F0 2248 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 LOC100289279A0A1B0GTE1 492 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 hCG_1642624A0A1W2PR95 340 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 FAM86B1E9PN63 330 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 HIP1O00291 1037 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PHACTR2O75167 634 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 DDAH1O94760 285 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PLEKHA8P1O95397 391 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 TIAF1O95411 115 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 FAM86B2P0C5J1 330 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 SFPQP23246 707 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 CNR2P34972 360 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 CCR3P51677 355 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 GP2P55259 537 aaKnown RBP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 SGO2Q562F6 1265 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 UNQ6494/PRO21346Q6UXR6 183 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 TEX2Q8IWB9 1127 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 COLGALT2Q8IYK4 626 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 GPR65Q8IYL9 337 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 SNX29Q8TEQ0 813 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PGBD1Q96JS3 809 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 MBOAT7Q96N66 472 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 IER2Q9BTL4 223 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PHF20Q9BVI0 1012 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 INO80BQ9C086 356 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 NRSN2Q9GZP1 204 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 RSAD1Q9HA92 442 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 HEBP1Q9NRV9 189 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 TBC1D22BQ9NU19 505 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 FNIP2Q9P278 1114 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PIN4Q9Y237 131 aaKnown RBP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 HIF3AQ9Y2N7 669 aa7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PRG3Q9Y2Y8 225 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-224ENST00000554040 PCDHB2Q9Y5E7 798 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms