RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 NUP62CLQ9H1M0 184 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 SFXN1Q9H9B4 322 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 ZDHHC7Q9NXF8 308 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 PRKAG3Q9UGI9 489 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 BARX2Q9UMQ3 279 aaPredicted RBP10.06□□□□□ -0.8
CHD8-206ENST00000553870 CDY1Q9Y6F8 540 aa10.06□□□□□ -0.8
CHD8-206ENST00000553870 ANK1P16157 1881 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 STX10O60499 249 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 AKAP3O75969 853 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 FGFR1OPO95684 399 aaKnown RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 C4BPAP04003 597 aaKnown RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 KRT19P08727 400 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 POU2F2P09086 479 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 HNRNPA1P09651 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD8-206ENST00000553870 EPB41P11171 864 aaKnown RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 ATF2P15336 505 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 BMP6P22004 513 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 MTHFRP42898 656 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 VAMP7P51809 220 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 SMARCB1Q12824 385 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 TRPC3Q13507 836 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 ANKRD40Q6AI12 368 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 ISM2Q6H9L7 571 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 OVOS1Q6IE37 1185 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 CCDC149Q6ZUS6 474 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 FAM186BQ8IYM0 893 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 SUSD6Q92537 303 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 ZNF516Q92618 1163 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 TAF4BQ92750 862 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 SYAP1Q96A49 352 aaPredicted RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 HPDLQ96IR7 371 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 RIPOR3Q96MK2 946 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 CEP63Q96MT8 703 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 POP1Q99575 1024 aaKnown RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 GZF1Q9H116 711 aaPredicted RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 VRTNQ9H8Y1 702 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 METTL14Q9HCE5 456 aaKnown RBP10.05□□□□□ -0.8
CHD8-206ENST00000553870 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 SIX4Q9UIU6 781 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 FBXL5Q9UKA1 691 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 FBXW11Q9UKB1 542 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 BRWD1Q9NSI6 2320 aa10.05□□□□□ -0.8
CHD8-206ENST00000553870 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 LRRIQ3A6PVS8 624 aaPredicted RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 PHACTR2O75167 634 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 ZMYND10O75800 440 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 GNA14O95837 355 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 CST3P01034 146 aaPredicted RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 CD44P16070 742 aaKnown RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 RPL17P18621 184 aaKnown RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 HOXA9P31269 272 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 ELF1P32519 619 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 LHX1P48742 406 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 RBM10P98175 930 aaKnown RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 BFSP1Q12934 665 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 PAK1Q13153 545 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 GPR17Q13304 367 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 SGSM1Q2NKQ1 1148 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 ZACNQ401N2 412 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 LIN9Q5TKA1 542 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 LMBRD2Q68DH5 695 aaPredicted RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 RSPO2Q6UXX9 243 aaPredicted RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 LIMS2Q7Z4I7 341 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 FRMD5Q7Z6J6 570 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 GPR149Q86SP6 731 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 TCEAL8Q8IYN2 117 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 PLEKHO2Q8TD55 490 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 NELFBQ8WX92 580 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 FAXDC2Q96IV6 333 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 MAN1C1Q9NR34 630 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 AFF4Q9UHB7 1163 aaKnown RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 DACH1Q9UI36 760 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 RWDD2AQ9UIY3 292 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 TIMM13Q9Y5L4 95 aaPredicted RBP10.04□□□□□ -0.8
CHD8-206ENST00000553870 SNX9Q9Y5X1 595 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 PTPRJQ12913 1337 aa10.04□□□□□ -0.8
CHD8-206ENST00000553870 CCDC195A0A1B0GUA6 201 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 BIN1O00499 593 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 GABRDO14764 452 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 ADAM12O43184 909 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 TACC1O75410 805 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
CHD8-206ENST00000553870 PTMSP20962 102 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 KCNQ1P51787 676 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 PMS1P54277 932 aaKnown RBP10.03□□□□□ -0.8
CHD8-206ENST00000553870 MYL7Q01449 175 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 ROR1Q01973 937 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 BIRC3Q13489 604 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 TDRD10Q5VZ19 366 aaKnown RBP10.03□□□□□ -0.8
CHD8-206ENST00000553870 WSCD1Q658N2 575 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 TTI2Q6NXR4 508 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 GLYCTKQ8IVS8 523 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 DCP1BQ8IZD4 617 aaKnown RBP10.03□□□□□ -0.8
CHD8-206ENST00000553870 TMEM130Q8N3G9 435 aa10.03□□□□□ -0.8
CHD8-206ENST00000553870 GPT2Q8TD30 523 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms