RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 AMHP03971 560 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 ACRP10323 421 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 CD58P19256 250 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 MSNP26038 577 aaKnown RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 RAP1GAPP47736 663 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 GATMP50440 423 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 KIF11P52732 1056 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 ZNF132P52740 706 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 CDH8P55286 799 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 LILRA4P59901 499 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 FPGSQ05932 587 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 DSC1Q08554 894 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 UPP1Q16831 310 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 ASTE1Q2TB18 679 aaPredicted RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 TOGARAM2Q6ZUX3 1019 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 ZNF571Q7Z3V5 609 aaPredicted RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 VPS36Q86VN1 386 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 RBBP8NLQ8NC74 664 aaPredicted RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 EPS8L1Q8TE68 723 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 BADQ92934 168 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 CASD1Q96PB1 797 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 FAM193BQ96PV7 902 aaPredicted RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
NEK9-202ENST00000553823 SDCBP2Q9H190 292 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 CACNG4Q9UBN1 327 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 CEP290O15078 2479 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 EIF3CLB5ME19 914 aaKnown RBP12.56□□□□□ -0.4
NEK9-202ENST00000553823 DDHD2O94830 711 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 UPP2O95045 317 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 IPO7O95373 1038 aaKnown RBP12.56□□□□□ -0.4
NEK9-202ENST00000553823 CYP11B1P15538 503 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 PAX3P23760 479 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 PDE6CP51160 858 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 DCLRE1AQ6PJP8 1040 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 COLGALT2Q8IYK4 626 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 EIF3CQ99613 913 aaKnown RBP12.56□□□□□ -0.4
NEK9-202ENST00000553823 AGPAT1Q99943 283 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 SYT11Q9BT88 431 aa12.56□□□□□ -0.4
NEK9-202ENST00000553823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEK9-202ENST00000553823 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
NEK9-202ENST00000553823 TBKBP1A7MCY6 615 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 CYB561D2O14569 222 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 HUS1O60921 280 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 CILPO75339 1184 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 TACC1O75410 805 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 B3GAT3O94766 335 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 LCA5LO95447 670 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 FGBP02675 491 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 CCDC175P0C221 793 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
NEK9-202ENST00000553823 WDR5P61964 334 aaKnown RBP12.55□□□□□ -0.4
NEK9-202ENST00000553823 KRT83P78385 493 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 BMS1Q14692 1282 aaKnown RBP12.55□□□□□ -0.4
NEK9-202ENST00000553823 SPA17Q15506 151 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 SLC18A3Q16572 532 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 SOWAHAQ2M3V2 549 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 DPH6Q7L8W6 267 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
NEK9-202ENST00000553823 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 TOP6BLQ8N6T0 577 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 C3orf58Q8NDZ4 430 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 ACRBPQ8NEB7 543 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 APPL2Q8NEU8 664 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 SLC20A1Q8WUM9 679 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 RABGGTAQ92696 567 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 TOP1MTQ969P6 601 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 SENP8Q96LD8 212 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 MRPL45Q9BRJ2 306 aaKnown RBP12.55□□□□□ -0.4
NEK9-202ENST00000553823 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 NRDE2Q9H7Z3 1164 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 ACP6Q9NPH0 428 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 SPTLC3Q9NUV7 552 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 ADAMTS1Q9UHI8 967 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
NEK9-202ENST00000553823 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
NEK9-202ENST00000553823 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 MYH10P35580 1976 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 A0A087X0T9 212 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 CCDC85CA6NKD9 419 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 ESPNB1AK53 854 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.42e-12■■■□□ 15.8
NEK9-202ENST00000553823 CCP110O43303 1012 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 ZSCAN12O43309 604 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 B4GALT3O60512 393 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 DGKIO75912 1065 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 PAEPP09466 180 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 FAM228BP0C875 321 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 CHRNB2P17787 502 aa12.54□□□□□ -0.4
NEK9-202ENST00000553823 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
NEK9-202ENST00000553823 GNA15P30679 374 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms