RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 METTL21EPA6NDL7 271 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 PHF2O75151 1096 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TXKP42681 527 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 MYL6P60660 151 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 USF2Q15853 346 aaPredicted RBP9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 KLHL38Q2WGJ6 581 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ATAD3BQ5T9A4 648 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 FRA10AC1Q70Z53 315 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 ARPINQ7Z6K5 226 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 C4orf33Q8N1A6 199 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 MIGA1Q8NAN2 632 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 SLC35B4Q969S0 331 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CDK19Q9BWU1 502 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 SNTG2Q9NY99 539 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 MAT2BQ9NZL9 334 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 WASF2Q9Y6W5 498 aa9.42□□□□□ -0.9
GTF2A1-203ENST00000553612 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CCDC162PA2VCL2 907 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CCDC182A6NF36 153 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 A8MV72 311 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 GSNP06396 782 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 UBL4AP11441 157 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 ZMYND11Q15326 602 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PPP2R5EQ16537 467 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 RFWD3Q6PCD5 774 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CRACR2BQ8N4Y2 399 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PSMA8Q8TAA3 256 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 VANGL1Q8TAA9 524 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CNOT8Q9UFF9 292 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PRXQ9BXM0 1461 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 H3BSA7 217 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PLEKP08567 350 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF844Q08AG5 666 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 DNASE1L3Q13609 305 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 POC5Q8NA72 575 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PACSIN1Q9BY11 444 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 SNX5Q9Y5X3 404 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 TTC26A0AVF1 554 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 UNC5CO95185 931 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 NAMPTP43490 491 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PPM1FP49593 454 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CYP20A1Q6UW02 462 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 SPARTQ8N0X7 666 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PNPT1Q8TCS8 783 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 SMG7Q92540 1137 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 KLF6Q99612 283 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 GDAQ9Y2T3 454 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 AP4S1Q9Y587 144 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 EXOC1LA0A1B0GW35 172 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 MEI4A8MW99 385 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 HIRAP54198 1017 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CSNK2BP67870 215 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 IFI35P80217 286 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 GNA12Q03113 381 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 ITGA9Q13797 1035 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 KSR2Q6VAB6 950 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 MRPS26Q9BYN8 205 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF221Q9UK13 617 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CUX1P39880 1505 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 IL33O95760 270 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 TRIM49P0CI25 452 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 TRIM49CP0CI26 452 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 ANPEPP15144 967 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PRIM2P49643 509 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 SEPHS1P49903 392 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 TMPRSS15P98073 1019 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF200P98182 395 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 NADK2Q4G0N4 442 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 CCDC58Q4VC31 144 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 DEPDC1Q5TB30 811 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 UBE3BQ7Z3V4 1068 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 RBM23Q86U06 439 aaKnown RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 FMR1NBQ8N0W7 255 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 NUP93Q8N1F7 819 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 PPP1R2P1Q96PQ5 205 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 DENND2DQ9H6A0 471 aaPredicted RBP9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.41□□□□□ -0.95e-6■■■□□ 17
GTF2A1-203ENST00000553612 SMYD2Q9NRG4 433 aa9.41□□□□□ -0.9
GTF2A1-203ENST00000553612 UBE4BO95155 1302 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 P4HBP07237 508 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 HOXA10P31260 410 aaPredicted RBP9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 PTPN9P43378 593 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 ZYXQ15942 572 aaKnown RBP9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 SYTL1Q8IYJ3 562 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 TINF2Q9BSI4 451 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 ADAMTS1Q9UHI8 967 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 TIMM22Q9Y584 194 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 ATF2P15336 505 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 TNNI1P19237 187 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 GARTP22102 1010 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 FOLH1Q04609 750 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 NCOA4Q13772 614 aa9.4□□□□□ -0.9
GTF2A1-203ENST00000553612 KCNJ8Q15842 424 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms