RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 AFG1LQ8WV93 481 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 LZICQ8WZA0 190 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 MAML1Q92585 1016 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 RABGGTAQ92696 567 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PLD4Q96BZ4 506 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 HAUS1Q96CS2 278 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 RHOXF2Q9BQY4 288 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 VCXQ9H320 206 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 CLSTN2Q9H4D0 955 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PIH1D3Q9NQM4 214 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 ABI2Q9NYB9 513 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 ADD3Q9UEY8 706 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 NOC2LQ9Y3T9 749 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 CORINQ9Y5Q5 1042 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TAF6LQ9Y6J9 622 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 LOXHD1Q8IVV2 1947 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ITIH6Q6UXX5 1313 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 A0A1B0GVL5 298 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 H0Y3Z8 333 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PRPF6O94906 941 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 RPLP1P05386 114 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 ATP1A3P13637 1013 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ST13P50502 369 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 KCNQ4P56696 695 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 NLRP5P59047 1200 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TBL3Q12788 808 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 MRPL28Q13084 256 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 COL9A3Q14050 684 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 RPS6KA2Q15349 733 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PCBP2Q15366 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
RDH11-204ENST00000553578 TMTC4Q5T4D3 741 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 NT5DC1Q5TFE4 455 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SLC2A7Q6PXP3 512 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 CCDC129Q6ZRS4 1044 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 Q6ZUG5 572 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TAOK1Q7L7X3 1001 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 IFNL3Q8IZI9 196 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TTC39CQ8N584 583 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 RNF10Q8N5U6 811 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 ARL6IP6Q8N6S5 226 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 IGSF22Q8N9C0 903 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PPFIBP2Q8ND30 876 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FLAD1Q8NFF5 587 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 HSPBAP1Q96EW2 488 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FAM89AQ96GI7 184 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 HERPUD2Q9BSE4 406 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PDGFDQ9GZP0 370 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 GLT8D2Q9H1C3 349 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SUGCTQ9HAC7 445 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 EPB41L4AQ9HCS5 686 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 STARD7Q9NQZ5 370 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 DENND2AQ9ULE3 1009 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ADAMTSL1Q8N6G6 1762 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ARPC4-TTLL3A0A0A6YYG9 625 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 DPPA5A6NC42 116 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 GOLGA8IPA6NC78 632 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 POLRMTO00411 1230 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 NEMP1O14524 444 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SIN3BO75182 1162 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FLOT1O75955 427 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PSAPP07602 524 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PDE6AP16499 860 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ADORA1P30542 326 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 GNG11P61952 73 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 GRAPQ13588 217 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 BLMHQ13867 455 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 RASGRF1Q13972 1273 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FAM173BQ6P4H8 233 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FOXR2Q6PJQ5 311 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 BLOC1S2Q6QNY1 142 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SLC22A25Q6T423 547 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SRGAP1Q7Z6B7 1085 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FUKQ8N0W3 1084 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 VPS52Q8N1B4 723 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 BEND7Q8N7W2 519 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 GRAPLQ8TC17 118 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 ANKRD49Q8WVL7 239 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TNFRSF25Q93038 417 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FAM84BQ96KN1 310 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 PPP1R13BQ96KQ4 1090 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 GMLQ99445 158 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SLC30A3Q99726 388 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 NUP58Q9BVL2 599 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PUS7LQ9H0K6 701 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 MKNK2Q9HBH9 465 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ABCB6Q9NP58 842 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FAM114A2Q9NRY5 505 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TBC1D23Q9NUY8 699 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 CLIC5Q9NZA1 410 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 CNTN3Q9P232 1028 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 WDR35Q9P2L0 1181 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 USP21Q9UK80 565 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 BCS1LQ9Y276 419 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 TNPO3Q9Y5L0 923 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 ATRNL1Q5VV63 1379 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 IGKV6D-41A0A0C4DH26 115 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 PDLIM1O00151 329 aa4.27□□□□□ -1.73
RDH11-204ENST00000553578 SGTAO43765 313 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms