RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 HEXIM1O94992 359 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 NPTXRO95502 500 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 KRT19P08727 400 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 CD58P19256 250 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 BRD2P25440 801 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 PTGIRP43119 386 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 MARCKSL1P49006 195 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 CRYBB1P53674 252 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 DRG2P55039 364 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 RWDD2BP57060 319 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 GJA9P57773 515 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 ZNF200P98182 395 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 BEX3Q00994 111 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 GUCY2DQ02846 1103 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 TMEM132DQ14C87 1099 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 SIX1Q15475 284 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 TRADDQ15628 312 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 CNGA2Q16280 664 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 WDR72Q3MJ13 1102 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 XKR4Q5GH76 650 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 PPP1R15BQ5SWA1 713 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 UBXN11Q5T124 520 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 AADACL2Q6P093 401 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 DENND1BQ6P3S1 775 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 SLC27A1Q6PCB7 646 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 CATSPER4Q7RTX7 472 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 SLC13A5Q86YT5 568 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 PRELID2Q8N945 189 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 SLC4A11Q8NBS3 891 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 DNAJB3Q8WWF6 145 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 HPDLQ96IR7 371 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 TSPAN18Q96SJ8 248 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 C11orf70Q9BRQ4 267 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 ADPGKQ9BRR6 497 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 TRIM7Q9C029 511 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 FAM49AQ9H0Q0 323 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 DDX47Q9H0S4 455 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 PARVAQ9NVD7 372 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 SNTG2Q9NY99 539 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 ITGA11Q9UKX5 1188 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 KIAA1257Q9ULG3 409 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 HPCAL4Q9UM19 191 aa9.98□□□□□ -0.81
MTHFD1-203ENST00000553391 EVPLQ92817 2033 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 C17orf102A2RUQ5 167 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 FAM187AA6NFU0 413 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 H3BQF6 201 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 AGPSO00116 658 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 MED7O43513 233 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 SPOPO43791 374 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 CILPO75339 1184 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ITGB3P05106 788 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 CALB1P05937 261 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 RARAP10276 462 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 VDRP11473 427 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 GNAT1P11488 350 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 AKR1A1P14550 325 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 POLR2BP30876 1174 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 MAN1A1P33908 653 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 GUCY2FP51841 1108 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 EPHB4P54760 987 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 PURAQ00577 322 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 TMEM62Q0P6H9 643 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 PAK2Q13177 524 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 FSCN1Q16658 493 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 CYP1B1Q16678 543 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 C2CD6Q53TS8 623 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ALS2CLQ60I27 953 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 LLGL2Q6P1M3 1020 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 MMS22LQ6ZRQ5 1243 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.816e-6■□□□□ 9.2
MTHFD1-203ENST00000553391 ERICH1Q86X53 443 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 PASD1Q8IV76 773 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 IQCKQ8N0W5 287 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 TTC39CQ8N584 583 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 PPP1R13LQ8WUF5 828 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 IFT81Q8WYA0 676 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 LENG1Q96BZ8 264 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 TMEM176AQ96HP8 235 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ZMAT2Q96NC0 199 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 TWNKQ96RR1 684 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 KATNAL1Q9BW62 490 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 EIF2AQ9BY44 585 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 UPF3AQ9H1J1 476 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 CXCL16Q9H2A7 254 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ERVK-5Q9HDB9 667 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 LCMT1Q9UIC8 334 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ANAPC7Q9UJX3 599 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 NFU1Q9UMS0 254 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
MTHFD1-203ENST00000553391 ZSCAN5CA6NGD5 496 aaPredicted RBP9.96□□□□□ -0.82
MTHFD1-203ENST00000553391 TLR3O15455 904 aaKnown RBP9.96□□□□□ -0.82
MTHFD1-203ENST00000553391 SYF2O95926 243 aaKnown RBP9.96□□□□□ -0.82
MTHFD1-203ENST00000553391 FAM153BP0C7A2 387 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms