RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ANAPC15P60006 121 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 TNK2Q07912 1038 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 PLD1Q13393 1074 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 ORC2Q13416 577 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 NOLC1Q14978 699 aaKnown RBP eCLIP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 SAFBQ15424 915 aaKnown RBP eCLIP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 GPR158Q5T848 1215 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 C4orf32Q8N8J7 132 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 ATAD1Q8NBU5 361 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 DDX1Q92499 740 aaKnown RBP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 DRC1Q96MC2 740 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 TMEM209Q96SK2 561 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 ARRDC1-AS1Q9H2J1 176 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 LRWD1Q9UFC0 647 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 RALYQ9UKM9 306 aaKnown RBP9.9□□□□□ -0.82
SYNE2-209ENST00000553308 ANGPTL2Q9UKU9 493 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
SYNE2-209ENST00000553308 TSC2P49815 1807 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 SFI1A8K8P3 1242 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 DPYSL4O14531 572 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 TM4SF5O14894 197 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 FOXD2O60548 495 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 TOM1L1O75674 476 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 GABRR2P28476 465 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 LRPAP1P30533 357 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 HOXA6P31267 233 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 AARSP49588 968 aaKnown RBP eCLIP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 GUCY2FP51841 1108 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 CDR1P51861 262 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 LIMK1P53667 647 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 CYP4F8P98187 520 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 CACNB1Q02641 598 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 RAD51AP2Q09MP3 1159 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 GPR17Q13304 367 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 ARHGAP29Q52LW3 1261 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 CENPPQ6IPU0 288 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 RINT1Q6NUQ1 792 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 C1orf186Q6ZWK4 172 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 KCNK18Q7Z418 384 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 DNAJB7Q7Z6W7 309 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 USP37Q86T82 979 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 KBTBD6Q86V97 674 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 C8orf76Q96K31 380 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 HAPLN2Q9GZV7 340 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 SMG9Q9H0W8 520 aaKnown RBP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 ATXN3LQ9H3M9 355 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 SMOC1Q9H4F8 434 aa9.89□□□□□ -0.83
SYNE2-209ENST00000553308 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
SYNE2-209ENST00000553308 TTC26A0AVF1 554 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 OR6C75A6NL08 312 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 PPEF2O14830 753 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 RPP40O75818 363 aaKnown RBP9.88□□□□□ -0.83
SYNE2-209ENST00000553308 EPN2O95208 641 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 ZNF806P0C7X5 589 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 CDC25AP30304 524 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 TNFSF9P41273 254 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 MCL1Q07820 350 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 STRN3Q13033 797 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 ARHGAP15Q53QZ3 475 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 OVOS1Q6IE37 1185 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 DSTYKQ6XUX3 929 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 HAUS6Q7Z4H7 955 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 SYNPOQ8N3V7 929 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 TMEM161BQ8NDZ6 487 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 BPIFB1Q8TDL5 484 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 GAB3Q8WWW8 586 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 PSMG2Q969U7 264 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 LPIN3Q9BQK8 851 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 OXCT2Q9BYC2 517 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-209ENST00000553308 FOXP1Q9H334 677 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-209ENST00000553308 C17orf75Q9HAS0 396 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 POLR3BQ9NW08 1133 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-209ENST00000553308 OBP2AQ9NY56 170 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 DNM3Q9UQ16 869 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 USP24Q9UPU5 2620 aa9.88□□□□□ -0.83
SYNE2-209ENST00000553308 EML5Q05BV3 1969 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CLDN3O15551 220 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CLTAP09496 248 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 CCDC192P0DO97 292 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 MAPTP10636 758 aaKnown RBP9.87□□□□□ -0.83
SYNE2-209ENST00000553308 TYMPP19971 482 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 MATR3P43243 847 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNE2-209ENST00000553308 RAP1GAPP47736 663 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 MCM2P49736 904 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 NEK4P51957 841 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 SHC2P98077 582 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 MYBPC2Q14324 1141 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 PDIA5Q14554 519 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 ZBTB6Q15916 424 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 IL17AQ16552 155 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 ITPRIPL2Q3MIP1 535 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 STPG1Q5TH74 334 aa9.87□□□□□ -0.83
SYNE2-209ENST00000553308 TCEAL6Q6IPX3 200 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms