RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CORO1BQ9BR76 489 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 CBWD1Q9BRT8 395 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 PCIF1Q9H4Z3 704 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 RBAKQ9NYW8 714 aaPredicted RBP14□□□□□ -0.17
ACTN1-207ENST00000553290 PVALEFA0A1B0GWK0 134 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 GOLGA8IPA6NC78 632 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 GOLGA8JA6NMD2 632 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 KPNA7A9QM74 516 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 CYB561D2O14569 222 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 CFHP08603 1231 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 OR4Q2P0C623 313 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 TFAMQ00059 246 aaKnown RBP13.99□□□□□ -0.17
ACTN1-207ENST00000553290 TWF1Q12792 350 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 SLC5A9Q2M3M2 681 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 SV2CQ496J9 727 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 PRSS36Q5K4E3 855 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 CYP4A22Q5TCH4 519 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 PARM1Q6UWI2 310 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 PDZD4Q76G19 769 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-207ENST00000553290 EPM2AIP1Q7L775 607 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-207ENST00000553290 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 ZNF507Q8TCN5 953 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 NOC3LQ8WTT2 800 aaKnown RBP13.99□□□□□ -0.17
ACTN1-207ENST00000553290 ING5Q8WYH8 240 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 HPS3Q969F9 1004 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 IRF2BPLQ9H1B7 796 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 SLC2A4RGQ9NR83 387 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 HSFX1Q9UBD0 423 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 TCHHQ07283 1943 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 TSC2P49815 1807 aa13.99□□□□□ -0.17
ACTN1-207ENST00000553290 UBE4BO95155 1302 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-207ENST00000553290 ALDH1A3P47895 512 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 WNT7BP56706 349 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 SNRPFP62306 86 aaKnown RBP13.98□□□□□ -0.17
ACTN1-207ENST00000553290 KRT85P78386 507 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 EHHADHQ08426 723 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 SURF1Q15526 300 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 CENPPQ6IPU0 288 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 TMEM105Q8N8V8 129 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 GLIS3Q8NEA6 775 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 FLCNQ8NFG4 579 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 GPR152Q8TDT2 470 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 MCRS1Q96EZ8 462 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 BORCS6Q96GS4 357 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 PGLYRP2Q96PD5 576 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 RTP3Q9BQQ7 232 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 RPP25Q9BUL9 199 aaKnown RBP13.98□□□□□ -0.17
ACTN1-207ENST00000553290 CEP72Q9P209 647 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 ITGA11Q9UKX5 1188 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 YIPF1Q9Y548 306 aa13.98□□□□□ -0.17
ACTN1-207ENST00000553290 MTMR11A4FU01 709 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 KRBA1A5PL33 1030 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-207ENST00000553290 VNN2O95498 520 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ITGB3P05106 788 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 TMEM191BP0C7N4 346 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 SLFN14P0C7P3 912 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 NPR3P17342 541 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 CEBPBP17676 345 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 AOC1P19801 751 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 CMA1P23946 247 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
ACTN1-207ENST00000553290 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-207ENST00000553290 HOXD13P35453 343 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 AFMP43652 599 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 EPHB3P54753 998 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 EPHA5P54756 1037 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 SMARCB1Q12824 385 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 TCF15Q12870 199 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 DUSP4Q13115 394 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 CWF19L1Q69YN2 538 aaKnown RBP13.97□□□□□ -0.17
ACTN1-207ENST00000553290 LRRC52Q8N7C0 313 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 C1orf127Q8N9H9 656 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ST13P5Q8NFI4 369 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-207ENST00000553290 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ANKRD36BP1Q96IX9 119 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 SPATA32Q96LK8 384 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 BLZF1Q9H2G9 400 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 PDE11AQ9HCR9 933 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ASAH2Q9NR71 780 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 HSPBP1Q9NZL4 362 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 USP25Q9UHP3 1055 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 CA14Q9ULX7 337 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 AGAP1Q9UPQ3 857 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ASB3Q9Y575 518 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
ACTN1-207ENST00000553290 STK25O00506 426 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 TGFB1I1O43294 461 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 ECI2O75521 394 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 MYL4P12829 197 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 RFX1P22670 979 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 CASP1P29466 404 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 CCR2P41597 374 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 TUFMP49411 452 aaKnown RBP13.96□□□□□ -0.17
ACTN1-207ENST00000553290 GPC5P78333 572 aa13.96□□□□□ -0.17
ACTN1-207ENST00000553290 RBP5P82980 135 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms