RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 GPR37L1O60883 481 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 POU2F2P09086 479 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 TMEM191BP0C7N4 346 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 ZXDAP98168 799 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 CYP24A1Q07973 514 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 ADCY1Q08828 1119 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 SNW1Q13573 536 aaKnown RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 SV2CQ496J9 727 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 GET4Q7L5D6 327 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 TCEAL8Q8IYN2 117 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 PLCD3Q8N3E9 789 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 OR10T2Q8NGX3 314 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 EDAQ92838 391 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 ACSF2Q96CM8 615 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 ZNF560Q96MR9 790 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 CGNQ9P2M7 1197 aaKnown RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 DNMT3BQ9UBC3 853 aaKnown RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 ITGA11Q9UKX5 1188 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
HDAC4-217ENST00000553145 INSL5Q9Y5Q6 135 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 GOLGA6L4A6NEF3 574 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 OR6C75A6NL08 312 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 XYLBO75191 536 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 GBP2P32456 591 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-217ENST00000553145 ELF1P32519 619 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 PNPLA4P41247 253 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 PSMD6Q15008 389 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 WSCD1Q658N2 575 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 RTL10Q7L3V2 364 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 CSGALNACT2Q8N6G5 542 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 LRRC52Q8N7C0 313 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 ANKRD36BP1Q96IX9 119 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 PGLYRP2Q96PD5 576 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 OXCT2Q9BYC2 517 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-217ENST00000553145 CRISPLD1Q9H336 500 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 SMOC2Q9H3U7 446 aa20.25■□□□□ 0.83
HDAC4-217ENST00000553145 NOTCH4Q99466 2003 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 KRT19P08727 400 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 FSHRP23945 695 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 FAM160A1Q05DH4 1040 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 BFSP1Q12934 665 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 GPR17Q13304 367 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 PNOCQ13519 176 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 MYBPC2Q14324 1141 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 SURF1Q15526 300 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 WDR49Q8IV35 697 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 GOLGA5Q8TBA6 731 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 PLEKHO2Q8TD55 490 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 CGRRF1Q99675 332 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 DMAC2Q9NW81 257 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 MAPK8IP1Q9UQF2 711 aa20.24■□□□□ 0.83
HDAC4-217ENST00000553145 DOCK8Q8NF50 2099 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 EXOC3O60645 756 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 TNNC2P02585 160 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 LRG1P02750 347 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 DLATP10515 647 aaKnown RBP20.23■□□□□ 0.83
HDAC4-217ENST00000553145 RBP5P82980 135 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 KCNB1Q14721 858 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 DUOXA2Q1HG44 320 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 TTC9BQ8N6N2 239 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 ITFG1Q8TB96 612 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 CCDC47Q96A33 483 aaKnown RBP20.23■□□□□ 0.83
HDAC4-217ENST00000553145 MFSD14AQ96MC6 490 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 EPS15L1Q9UBC2 864 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 DSEQ9UL01 958 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 L1RE1Q9UN81 338 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 SORCS3Q9UPU3 1222 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 YIPF1Q9Y548 306 aa20.23■□□□□ 0.83
HDAC4-217ENST00000553145 MTMR11A4FU01 709 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 PDXKO00764 312 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 NR3C1P04150 777 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 CASP4P49662 377 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 CDR1P51861 262 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 PABPC1LQ4VXU2 614 aaKnown RBP20.22■□□□□ 0.83
HDAC4-217ENST00000553145 TRIM67Q6ZTA4 783 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 METTL23Q86XA0 190 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 ZNF516Q92618 1163 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
HDAC4-217ENST00000553145 FNBP1Q96RU3 617 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 ZCWPW1Q9H0M4 648 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 CEP72Q9P209 647 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 MAFFQ9ULX9 164 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 TECTAO75443 2155 aa20.22■□□□□ 0.83
HDAC4-217ENST00000553145 PRR33A8MZF0 331 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 GADD45BO75293 160 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-217ENST00000553145 RHOP08100 348 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 LAMP2P13473 410 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 TNNI1P19237 187 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 TWF1Q12792 350 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 DUSP4Q13115 394 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 MTMR3Q13615 1198 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 SLC5A9Q2M3M2 681 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 CENPPQ6IPU0 288 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 TRAPPC11Q7Z392 1133 aa20.21■□□□□ 0.83
HDAC4-217ENST00000553145 SMYD4Q8IYR2 804 aaPredicted RBP20.21■□□□□ 0.83
HDAC4-217ENST00000553145 ATAD1Q8NBU5 361 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms