RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 MAN2B1O00754 1011 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
NEK3-204ENST00000552973 DDIT3P35638 169 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 LONP1P36776 959 aaKnown RBP12.44□□□□□ -0.42
NEK3-204ENST00000552973 MCM2P49736 904 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 GTF2BQ00403 316 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 TMEM132DQ14C87 1099 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 ZNF528Q3MIS6 628 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 C9orf57Q5W0N0 161 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 ADALQ6DHV7 355 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 ARMCX5Q6P1M9 558 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 DNAJB7Q7Z6W7 309 aaPredicted RBP12.44□□□□□ -0.42
NEK3-204ENST00000552973 TMC8Q8IU68 726 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 YAF2Q8IY57 180 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 LEMD2Q8NC56 503 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 OR10T2Q8NGX3 314 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 LARP4BQ92615 738 aaKnown RBP12.44□□□□□ -0.42
NEK3-204ENST00000552973 KCNN1Q92952 543 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 EPSTI1Q96J88 318 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 ATXN3LQ9H3M9 355 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 CLIC4Q9Y696 253 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 PIAS3Q9Y6X2 628 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 NOTCH4Q99466 2003 aa12.44□□□□□ -0.42
NEK3-204ENST00000552973 PTPRZ1P23471 2315 aaPredicted RBP12.43□□□□□ -0.42
NEK3-204ENST00000552973 PIRO00625 290 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 SLC26A4O43511 780 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 BMP15O95972 392 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 ADRB2P07550 413 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 ODC1P11926 461 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 TYMPP19971 482 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 CCNE1P24864 410 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 MAGEA9P43362 315 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 RPS9P46781 194 aaKnown RBP12.43□□□□□ -0.42
NEK3-204ENST00000552973 SOX9P48436 509 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 PLD1Q13393 1074 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 FAM173BQ6P4H8 233 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 ARID3BQ8IVW6 561 aaPredicted RBP12.43□□□□□ -0.42
NEK3-204ENST00000552973 MFSD6LQ8IWD5 586 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 CD302Q8IX05 232 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
NEK3-204ENST00000552973 FAM200AQ8TCP9 573 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 CSGALNACT1Q8TDX6 532 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 DEPDC1BQ8WUY9 529 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 SEPT5Q99719 369 aaPredicted RBP12.43□□□□□ -0.42
NEK3-204ENST00000552973 LPIN3Q9BQK8 851 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 OXCT2Q9BYC2 517 aaPredicted RBP12.43□□□□□ -0.42
NEK3-204ENST00000552973 GPR88Q9GZN0 384 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 ZSCAN32Q9NX65 697 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 NCDNQ9UBB6 729 aa12.43□□□□□ -0.42
NEK3-204ENST00000552973 SLC38A8A6NNN8 435 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 CYB561D2O14569 222 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 GABRR2P28476 465 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 FOXK2Q01167 660 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
NEK3-204ENST00000552973 MYBPC2Q14324 1141 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 MGAT5BQ3V5L5 792 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 SLC39A12Q504Y0 691 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 GPR158Q5T848 1215 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 GAREM2Q75VX8 874 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 ERMP1Q7Z2K6 904 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 ZNF687Q8N1G0 1237 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 ZBTB44Q8NCP5 570 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 ZFYVE19Q96K21 471 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 CLIC6Q96NY7 704 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 LRRC3BQ96PB8 259 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 TSPAN18Q96SJ8 248 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
NEK3-204ENST00000552973 CCSER1Q9C0I3 900 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 TRPV4Q9HBA0 871 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 DPP3Q9NY33 737 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 AGO2Q9UKV8 859 aaKnown RBP12.42□□□□□ -0.42
NEK3-204ENST00000552973 PCDHGA2Q9Y5H1 932 aa12.42□□□□□ -0.42
NEK3-204ENST00000552973 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.42□□□□□ -0.42
NEK3-204ENST00000552973 MYH15Q9Y2K3 1946 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 ARNTLO00327 626 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 DPYSL4O14531 572 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 CHRNB1P11230 501 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 SCP2P22307 547 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 KPNA1P52294 538 aaPredicted RBP12.41□□□□□ -0.42
NEK3-204ENST00000552973 CYP4F8P98187 520 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 KCNA1Q09470 495 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 PTPAQ15257 358 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 LPAL2Q16609 132 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 SLFN12LQ6IEE8 588 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 CRELD2Q6UXH1 353 aaPredicted RBP12.41□□□□□ -0.42
NEK3-204ENST00000552973 ZNF720Q7Z2F6 126 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 LRRTM3Q86VH5 581 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 EFCAB13Q8IY85 973 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 ZSWIM2Q8NEG5 633 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 POMGNT1Q8WZA1 660 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 PSMG2Q969U7 264 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
NEK3-204ENST00000552973 PANK2Q9BZ23 570 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms